changes due to now being on rolling

Signed-off-by: Christophe Bedard <christophe.bedard@apex.ai>

.github/workflows/mirror-rolling-to-master.yaml

@@ -0,0 +1,13 @@
+name: Mirror rolling to master
+
+on:
+  push:
+    branches: [ rolling ]
+
+jobs:
+  mirror-to-master:
+    runs-on: ubuntu-latest
+    steps:
+    - uses: zofrex/mirror-branch@v1
+      with:
+        target-branch: master

.github/workflows/test.yml

@@ -0,0 +1,53 @@
+name: Test
+on:
+  pull_request:
+  push:
+    branches:
+      - rolling
+  schedule:
+    - cron: "0 5 * * *"
+jobs:
+  build-and-test:
+    runs-on: ubuntu-latest
+    container:
+      image: ubuntu:24.04
+    continue-on-error: ${{ matrix.build-type == 'binary' }}
+    strategy:
+      matrix:
+          distro:
+            - rolling
+          build-type:
+            - binary
+            - source
+    env:
+      ROS2_REPOS_FILE_URL: 'https://raw.githubusercontent.com/ros2/ros2/${{ matrix.distro }}/ros2.repos'
+    steps:
+    - uses: actions/checkout@v3
+    - uses: ros-tooling/setup-ros@master
+      with:
+        required-ros-distributions: ${{ matrix.build-type == 'binary' && matrix.distro || '' }}
+        use-ros2-testing: true
+    - uses: ros-tooling/action-ros-ci@master
+      with:
+        package-name: ros2trace_analysis tracetools_analysis
+        target-ros2-distro: ${{ matrix.distro }}
+        vcs-repo-file-url: ${{ matrix.build-type == 'source' && env.ROS2_REPOS_FILE_URL || '' }}
+        colcon-defaults: |
+          {
+            "build": {
+              "mixin": [
+                "coverage-pytest"
+              ]
+            },
+            "test": {
+              "mixin": [
+                "coverage-pytest"
+              ],
+              "executor": "sequential",
+              "retest-until-pass": 2,
+              "pytest-args": ["-m", "not xfail"]
+            }
+          }
+    - uses: codecov/codecov-action@v3
+      with:
+        files: ros_ws/coveragepy/.coverage

.gitlab-ci.yml

@@ -1,55 +0,0 @@
-variables:
-  DOCKER_DRIVER: overlay2
-  PACKAGES_LIST: tracetools_analysis ros2trace_analysis
-  BASE_IMAGE_ID: registry.gitlab.com/micro-ros/ros_tracing/ci_base
-  DISTRO: foxy
-  ROS2TRACING_BRANCH: master
-
-stages:
-  - build_test
-  - report
-
-.global_artifacts: &global_artifacts
-  artifacts:
-    paths:
-      - install
-      - build/*/test_results/*/*.xunit.xml
-      - build/*/pytest.xml
-    reports:
-      junit:
-        - build/*/test_results/*/*.xunit.xml
-        - build/*/pytest.xml
-
-before_script:
-  - . /root/ws/install/local_setup.sh
-  - python3 get_branch.py --check
-  - git clone https://gitlab.com/micro-ROS/ros_tracing/ros2_tracing.git --branch $(python3 get_branch.py)
-
-build:
-  stage: build_test
-  image: $BASE_IMAGE_ID:$DISTRO
-  script:
-    - colcon build --symlink-install --event-handlers console_cohesion+ --packages-up-to $PACKAGES_LIST
-    - colcon test --event-handlers console_cohesion+ --packages-select $PACKAGES_LIST
-    - colcon test-result --all
-  <<: *global_artifacts
-
-coverage:
-  stage: report
-  image: $BASE_IMAGE_ID:$DISTRO
-  script:
-    - colcon build --symlink-install --event-handlers console_cohesion+ --packages-up-to $PACKAGES_LIST --mixin coverage-pytest --cmake-args -DBUILD_TESTING=ON --no-warn-unused-cli
-    - colcon test --event-handlers console_cohesion+ --packages-select $PACKAGES_LIST --mixin coverage-pytest
-    - colcon test-result --all
-    - bash <(curl -s https://codecov.io/bash)
-    - colcon coveragepy-result --packages-select $PACKAGES_LIST --verbose --coverage-report-args -m
-  allow_failure: true
-  <<: *global_artifacts
-
-trigger_gen_docs:
-  stage: report
-  only:
-    refs:
-      - master
-      - foxy
-  trigger: micro-ROS/ros_tracing/tracetools_analysis-api

README.md

@@ -1,66 +1,82 @@
 # tracetools_analysis
 
-[![pipeline status](https://gitlab.com/micro-ROS/ros_tracing/tracetools_analysis/badges/master/pipeline.svg)](https://gitlab.com/micro-ROS/ros_tracing/tracetools_analysis/commits/master)
+<!-- [![GitHub CI](https://github.com/ros-tracing/tracetools_analysis/actions/workflows/test.yml/badge.svg?branch=rolling)](https://github.com/ros-tracing/tracetools_analysis/actions/workflows/test.yml) -->
+[![codecov](https://codecov.io/gh/ros-tracing/tracetools_analysis/branch/rolling/graph/badge.svg)](https://codecov.io/gh/ros-tracing/tracetools_analysis)
 
-Analysis tools for [ROS 2 tracing](https://gitlab.com/micro-ROS/ros_tracing/ros2_tracing).
+Analysis tools for [`ros2_tracing`](https://github.com/ros2/ros2_tracing).
+
+**Note**: make sure to use the right branch, depending on the ROS 2 distro: [use `rolling` for Rolling, `humble` for Humble, etc.](https://docs.ros.org/en/rolling/The-ROS2-Project/Contributing/Developer-Guide.html)
 
 ## Trace analysis
 
-After generating a trace (see [`ros2_tracing`](https://gitlab.com/micro-ROS/ros_tracing/ros2_tracing#tracing)), we can analyze it to extract useful execution data.
+After generating a trace (see [`ros2_tracing`](https://github.com/ros2/ros2_tracing#tracing)), we can analyze it to extract useful execution data.
 
 ### Commands
 
-Since CTF traces (the output format of the [LTTng](https://lttng.org/) tracer) are very slow to read, we first convert them into a single file which can be read much faster.
+Then we can process a trace to create a data model which could be queried for analysis.
 
-```
-$ ros2 trace-analysis convert /path/to/trace/directory
-```
-
-Then we can process it to create a data model which could be queried for analysis.
-
-```
+```shell
 $ ros2 trace-analysis process /path/to/trace/directory
 ```
 
-### Jupyter
+Note that this simply outputs lightly-processed ROS 2 trace data which is split into a number of pandas `DataFrame`s.
+This can be used to quickly check the trace data.
+For real data processing/trace analysis, see [*Analysis*](#analysis).
 
-The last command will process and output the raw data models, but to actually display results, process and analyze using a Jupyter Notebook.
+Since CTF traces (the output format of the [LTTng](https://lttng.org/) tracer) are very slow to read, the trace is first converted into a single file which can be read much faster and can be re-used to run many analyses.
+This is done automatically, but if the trace changed after the file was generated, it can be re-generated using the `--force-conversion` option.
+Run with `--help` to see all options.
+
+### Analysis
+
+The command above will process and output raw data models.
+We need to actually analyze the data and display some results.
+We recommend doing this in a Jupyter Notebook, but you can do this in a normal Python file.
 
 ```shell
 $ jupyter notebook
 ```
 
-Then navigate to the [`analysis/`](./tracetools_analysis/analysis/) directory, and select one of the provided notebooks, or create your own!
+Navigate to the [`analysis/`](./tracetools_analysis/analysis/) directory, and select one of the provided notebooks, or create your own!
 
 For example:
 
 ```python
-from tracetools_analysis import loading
-from tracetools_analysis import processor
-from tracetools_analysis import utils
+from tracetools_analysis.loading import load_file
+from tracetools_analysis.processor import Processor
+from tracetools_analysis.processor.cpu_time import CpuTimeHandler
+from tracetools_analysis.processor.ros2 import Ros2Handler
+from tracetools_analysis.utils.cpu_time import CpuTimeDataModelUtil
+from tracetools_analysis.utils.ros2 import Ros2DataModelUtil
 
 # Load trace directory or converted trace file
-events = loading.load_file('/path/to/trace/or/converted/file')
+events = load_file('/path/to/trace/or/converted/file')
 
 # Process
-ros2_handler = processor.Ros2Handler()
-cpu_handler = processor.CpuTimeHandler()
+ros2_handler = Ros2Handler()
+cpu_handler = CpuTimeHandler()
 
-processor.Processor(ros2_handler, cpu_handler).process(events)
+Processor(ros2_handler, cpu_handler).process(events)
 
 # Use data model utils to extract information
-ros2_util = utils.ros2.Ros2DataModelUtil(ros2_handler.data)
-cpu_util = utils.cpu_time.CpuTimeDataModelUtil(cpu_handler.data)
+ros2_util = Ros2DataModelUtil(ros2_handler.data)
+cpu_util = CpuTimeDataModelUtil(cpu_handler.data)
 
-callback_durations = ros2_util.get_callback_durations()
+callback_symbols = ros2_util.get_callback_symbols()
+callback_object, callback_symbol = list(callback_symbols.items())[0]
+callback_durations = ros2_util.get_callback_durations(callback_object)
 time_per_thread = cpu_util.get_time_per_thread()
 # ...
 
-# Display, e.g. with bokeh or matplotlib
+# Display, e.g., with bokeh, matplotlib, print, etc.
+print(callback_symbol)
+print(callback_durations)
+
+print(time_per_thread)
 # ...
 ```
 
-Note: bokeh has to be installed manually, e.g. with `pip`:
+Note: bokeh has to be installed manually, e.g., with `pip`:
 
 ```shell
 $ pip3 install bokeh
@@ -68,7 +84,7 @@ $ pip3 install bokeh
 
 ## Design
 
-See the [`ros2_tracing` design document](https://gitlab.com/micro-ROS/ros_tracing/ros2_tracing/blob/master/doc/design_ros_2.md), especially the [*Goals and requirements*](https://gitlab.com/micro-ROS/ros_tracing/ros2_tracing/blob/master/doc/design_ros_2.md#goals-and-requirements) and [*Analysis*](https://gitlab.com/micro-ROS/ros_tracing/ros2_tracing/blob/master/doc/design_ros_2.md#analysis) sections.
+See the [`ros2_tracing` design document](https://github.com/ros2/ros2_tracing/blob/rolling/doc/design_ros_2.md), especially the [*Goals and requirements*](https://github.com/ros2/ros2_tracing/blob/rolling/doc/design_ros_2.md#goals-and-requirements) and [*Analysis*](https://github.com/ros2/ros2_tracing/blob/rolling/doc/design_ros_2.md#analysis) sections.
 
 ## Packages
 
@@ -80,4 +96,4 @@ Package containing a `ros2cli` extension to perform trace analysis.
 
 Package containing tools for analyzing trace data.
 
-See the [API documentation](https://micro-ros.gitlab.io/ros_tracing/tracetools_analysis-api/).
+See the [API documentation](https://docs.ros.org/en/rolling/p/tracetools_analysis/).

codecov.yml

@@ -0,0 +1,2 @@
+fixes:
+  - "/builds/ros-tracing/tracetools_analysis/::"

get_branch.py

@@ -1,119 +0,0 @@
-# Copyright 2020 Christophe Bedard
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-#     http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-
-"""Get ros2_tracing branch name from the last commit or a default value."""
-
-import argparse
-import os
-import sys
-from typing import List
-from typing import Optional
-
-
-ENV_DEFAULT_BRANCH = 'ROS2TRACING_BRANCH'
-ENV_COMMIT_DESCRIPTION = 'CI_COMMIT_DESCRIPTION'
-ROS2_TRACING_BRANCH_TRAILER_TOKEN = 'Ros2-tracing-branch'
-
-
-def add_args(parser: argparse.ArgumentParser) -> None:
-    parser.add_argument(
-        '-c', '--check',
-        action='store_true',
-        default=False,
-        help='only process and print resulting branch in a verbose way',
-    )
-
-
-def parse_args() -> argparse.Namespace:
-    parser = argparse.ArgumentParser(
-        description='Extract name of the (optional) ros2_tracing branch to be used for CI',
-    )
-    add_args(parser)
-    return parser.parse_args()
-
-
-def get_trailer_value(
-    trailer_name: str,
-    commit_description: str,
-    check: bool = False,
-) -> Optional[str]:
-    # Get trailer line
-    trailer_lines = [
-        line for line in commit_description.split('\n') if trailer_name in line
-    ]
-    if len(trailer_lines) == 0:
-        if check:
-            print(f'could not find any trailer lines for: \'{trailer_name}\'')
-        return None
-    elif len(trailer_lines) > 1:
-        if check:
-            print(
-                f'found more than one trailer lines for: \'{trailer_name}\' '
-                '(will use the first one)'
-            )
-
-    # Extract value
-    line = trailer_lines[0]
-    if not (trailer_name + ':') in line:
-        if check:
-            print(f'could not find: \'{trailer_name}:\'')
-        return None
-    key_value = line.split(':')
-    if len(key_value) != 2:
-        if check:
-            print(f'misformed trailer line: \'{key_value}\'')
-        return None
-    value = key_value[1].strip()
-    if len(value) == 0:
-        if check:
-            print(f'misformed trailer value: \'{value}\'')
-        return None
-
-    return value
-
-
-def main() -> int:
-    args = parse_args()
-    check = args.check
-
-    # Get default value
-    default_branch = os.environ.get(ENV_DEFAULT_BRANCH, None)
-    if default_branch is None:
-        if check:
-            print(f'could not get environment variable: \'{ENV_DEFAULT_BRANCH}\'')
-        return 1
-
-    # Get commit description
-    commit_description = os.environ.get(ENV_COMMIT_DESCRIPTION, None)
-    if commit_description is None:
-        if check:
-            print(f'could not get environment variable: \'{ENV_COMMIT_DESCRIPTION}\'')
-        return None
-
-    # Get value
-    branch = get_trailer_value(
-        ROS2_TRACING_BRANCH_TRAILER_TOKEN,
-        commit_description,
-        check,
-    )
-
-    # Print value
-    prefix = 'ros2_tracing branch: ' if check else ''
-    print(prefix + (branch or default_branch))
-
-    return 0
-
-
-if __name__ == '__main__':
-    sys.exit(main())

pytest.ini

@@ -0,0 +1,3 @@
+[pytest]
+junit_family=xunit2
+

ros2trace_analysis/CHANGELOG.rst

@@ -2,6 +2,12 @@
 Changelog for package ros2trace_analysis
 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
 
+3.0.0 (2022-01-21)
+------------------
+* Add 'process --convert-only' option
+* Deprecate 'convert' verb since it is just an implementation detail
+* Contributors: Christophe Bedard
+
 0.2.2 (2019-11-19)
 ------------------
 * Add flag for hiding processing results with the process verb

ros2trace_analysis/package.xml

@@ -2,10 +2,13 @@
 <?xml-model href="http://download.ros.org/schema/package_format2.xsd" schematypens="http://www.w3.org/2001/XMLSchema"?>
 <package format="2">
   <name>ros2trace_analysis</name>
-  <version>1.0.1</version>
+  <version>3.1.0</version>
   <description>The trace-analysis command for ROS 2 command line tools.</description>
   <maintainer email="bedard.christophe@gmail.com">Christophe Bedard</maintainer>
   <license>Apache 2.0</license>
+  <url type="website">https://index.ros.org/p/ros2trace_analysis/</url>
+  <url type="repository">https://github.com/ros-tracing/tracetools_analysis</url>
+  <url type="bugtracker">https://github.com/ros-tracing/tracetools_analysis/issues</url>
   <author email="christophe.bedard@apex.ai">Christophe Bedard</author>
 
   <depend>ros2cli</depend>

ros2trace_analysis/ros2trace_analysis/verb/convert.py

@@ -18,12 +18,14 @@ from tracetools_analysis.convert import convert
 
 
 class ConvertVerb(VerbExtension):
-    """Convert trace data to a file."""
+    """Convert trace data to a file. DEPRECATED: use the 'process' verb directly."""
 
     def add_arguments(self, parser, cli_name):
         add_args(parser)
 
     def main(self, *, args):
+        import warnings
+        warnings.warn("'convert' is deprecated, use 'process' directly instead", stacklevel=2)
         return convert(
             args.trace_directory,
             args.output_file_name,

ros2trace_analysis/ros2trace_analysis/verb/process.py

@@ -18,7 +18,7 @@ from tracetools_analysis.process import process
 
 
 class ProcessVerb(VerbExtension):
-    """Process a file converted from a trace directory and output model data."""
+    """Process ROS 2 trace data and output model data."""
 
     def add_arguments(self, parser, cli_name):
         add_args(parser)
@@ -28,4 +28,5 @@ class ProcessVerb(VerbExtension):
             args.input_path,
             args.force_conversion,
             args.hide_results,
+            args.convert_only,
         )

ros2trace_analysis/setup.py

@@ -5,7 +5,7 @@ package_name = 'ros2trace_analysis'
 
 setup(
     name=package_name,
-    version='1.0.1',
+    version='3.1.0',
     packages=find_packages(exclude=['test']),
     data_files=[
         ('share/' + package_name, ['package.xml']),
@@ -22,7 +22,7 @@ setup(
     ),
     author='Christophe Bedard',
     author_email='christophe.bedard@apex.ai',
-    url='https://gitlab.com/micro-ROS/ros_tracing/tracetools_analysis',
+    url='https://github.com/ros-tracing/tracetools_analysis',
     keywords=[],
     description='The trace-analysis command for ROS 2 command line tools.',
     long_description=(

ros2trace_analysis/test/test_flake8.py

@@ -12,12 +12,14 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 
-from ament_flake8.main import main
+from ament_flake8.main import main_with_errors
 import pytest
 
 
 @pytest.mark.flake8
 @pytest.mark.linter
 def test_flake8():
-    rc = main(argv=[])
-    assert rc == 0, 'Found errors'
+    rc, errors = main_with_errors(argv=[])
+    assert rc == 0, \
+        'Found %d code style errors / warnings:\n' % len(errors) + \
+        '\n'.join(errors)

test_ros2trace_analysis/.coveragerc

@@ -0,0 +1,4 @@
+[run]
+omit =
+    setup.py
+    test/*

test_ros2trace_analysis/.gitignore

@@ -0,0 +1,3 @@
+*~
+*.pyc
+

test_ros2trace_analysis/CHANGELOG.rst

@@ -0,0 +1,9 @@
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+Changelog for package test_ros2trace_analysis
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+3.1.0 (2024-06-15)
+------------------
+* Fix test_ros2trace_analysis package version (`#26 <https://github.com/ros-tracing/tracetools_analysis/issues/26>`_)
+* Use tracepoint names from tracetools_trace and add tests (`#25 <https://github.com/ros-tracing/tracetools_analysis/issues/25>`_)
+* Contributors: Christophe Bedard

test_ros2trace_analysis/package.xml

@@ -0,0 +1,32 @@
+<?xml version="1.0"?>
+<?xml-model href="http://download.ros.org/schema/package_format3.xsd" schematypens="http://www.w3.org/2001/XMLSchema"?>
+<package format="3">
+  <name>test_ros2trace_analysis</name>
+  <version>3.1.0</version>
+  <description>Tests for the ros2trace_analysis package.</description>
+  <maintainer email="bedard.christophe@gmail.com">Christophe Bedard</maintainer>
+  <license>Apache 2.0</license>
+  <url type="website">https://index.ros.org/p/test_ros2trace_analysis/</url>
+  <url type="repository">https://github.com/ros-tracing/tracetools_analysis</url>
+  <url type="bugtracker">https://github.com/ros-tracing/tracetools_analysis/issues</url>
+  <author email="bedard.christophe@gmail.com">Christophe Bedard</author>
+
+  <test_depend>ament_copyright</test_depend>
+  <test_depend>ament_flake8</test_depend>
+  <test_depend>ament_mypy</test_depend>
+  <test_depend>ament_pep257</test_depend>
+  <test_depend>ament_xmllint</test_depend>
+  <test_depend>launch</test_depend>
+  <test_depend>launch_ros</test_depend>
+  <test_depend>python3-pytest</test_depend>
+  <test_depend>ros2run</test_depend>
+  <test_depend>ros2trace</test_depend>
+  <test_depend>ros2trace_analysis</test_depend>
+  <test_depend>test_tracetools</test_depend>
+  <test_depend>tracetools</test_depend>
+  <test_depend>tracetools_trace</test_depend>
+
+  <export>
+    <build_type>ament_python</build_type>
+  </export>
+</package>

test_ros2trace_analysis/setup.py

@@ -0,0 +1,26 @@
+from setuptools import find_packages
+from setuptools import setup
+
+package_name = 'test_ros2trace_analysis'
+
+setup(
+    name=package_name,
+    version='3.1.0',
+    packages=find_packages(exclude=['test']),
+    data_files=[
+        ('share/' + package_name, ['package.xml']),
+        ('share/ament_index/resource_index/packages',
+            ['resource/' + package_name]),
+    ],
+    install_requires=['setuptools'],
+    zip_safe=True,
+    maintainer='Christophe Bedard',
+    maintainer_email='bedard.christophe@gmail.com',
+    author='Christophe Bedard',
+    author_email='bedard.christophe@gmail.com',
+    url='https://github.com/ros-tracing/tracetools_analysis',
+    keywords=[],
+    description='Tests for the ros2trace_analysis package.',
+    license='Apache 2.0',
+    tests_require=['pytest'],
+)

test_ros2trace_analysis/test/test_copyright.py

@@ -0,0 +1,23 @@
+# Copyright 2017 Open Source Robotics Foundation, Inc.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+from ament_copyright.main import main
+import pytest
+
+
+@pytest.mark.copyright
+@pytest.mark.linter
+def test_copyright():
+    rc = main(argv=['.', 'test'])
+    assert rc == 0, 'Found errors'

test_ros2trace_analysis/test/test_flake8.py

@@ -0,0 +1,25 @@
+# Copyright 2017 Open Source Robotics Foundation, Inc.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+from ament_flake8.main import main_with_errors
+import pytest
+
+
+@pytest.mark.flake8
+@pytest.mark.linter
+def test_flake8():
+    rc, errors = main_with_errors(argv=[])
+    assert rc == 0, \
+        'Found %d code style errors / warnings:\n' % len(errors) + \
+        '\n'.join(errors)

test_ros2trace_analysis/test/test_mypy.py

@@ -0,0 +1,22 @@
+# Copyright 2019 Canonical Ltd
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+from ament_mypy.main import main
+import pytest
+
+
+@pytest.mark.mypy
+@pytest.mark.linter
+def test_mypy():
+    assert main(argv=[]) == 0, 'Found errors'

test_ros2trace_analysis/test/test_pep257.py

@@ -0,0 +1,23 @@
+# Copyright 2017 Open Source Robotics Foundation, Inc.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+from ament_pep257.main import main
+import pytest
+
+
+@pytest.mark.linter
+@pytest.mark.pep257
+def test_pep257():
+    rc = main(argv=[])
+    assert rc == 0, 'Found code style errors / warnings'

test_ros2trace_analysis/test/test_ros2trace_analysis/test_process.py

@@ -0,0 +1,175 @@
+# Copyright 2024 Apex.AI, Inc.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+import os
+from pathlib import Path
+import shutil
+import subprocess
+import tempfile
+from typing import Dict
+from typing import List
+from typing import Optional
+import unittest
+
+from launch import LaunchDescription
+from launch import LaunchService
+from launch_ros.actions import Node
+from tracetools_trace.tools.lttng import is_lttng_installed
+
+
+def are_tracepoints_included() -> bool:
+    """
+    Check if tracing instrumentation is enabled and if tracepoints are included.
+
+    :return: True if tracepoints are included, False otherwise
+    """
+    if not is_lttng_installed():
+        return False
+    process = subprocess.run(
+        ['ros2', 'run', 'tracetools', 'status'],
+        stdout=subprocess.PIPE,
+        stderr=subprocess.PIPE,
+        encoding='utf-8',
+    )
+    return 0 == process.returncode
+
+
+@unittest.skipIf(not is_lttng_installed(minimum_version='2.9.0'), 'LTTng is required')
+class TestROS2TraceAnalysisCLI(unittest.TestCase):
+
+    def __init__(self, *args) -> None:
+        super().__init__(
+            *args,
+        )
+
+    def create_test_tmpdir(self, test_name: str) -> str:
+        prefix = self.__class__.__name__ + '__' + test_name
+        return tempfile.mkdtemp(prefix=prefix)
+
+    def run_command(
+        self,
+        args: List[str],
+        *,
+        env: Optional[Dict[str, str]] = None,
+    ) -> subprocess.Popen:
+        print('=>running:', args)
+        process_env = os.environ.copy()
+        process_env['PYTHONUNBUFFERED'] = '1'
+        if env:
+            process_env.update(env)
+        return subprocess.Popen(
+            args,
+            stdin=subprocess.PIPE,
+            stdout=subprocess.PIPE,
+            stderr=subprocess.PIPE,
+            encoding='utf-8',
+            env=process_env,
+        )
+
+    def wait_and_print_command_output(
+        self,
+        process: subprocess.Popen,
+    ) -> int:
+        stdout, stderr = process.communicate()
+        stdout = stdout.strip(' \r\n\t')
+        stderr = stderr.strip(' \r\n\t')
+        print('=>stdout:\n' + stdout)
+        print('=>stderr:\n' + stderr)
+        return process.wait()
+
+    def run_command_and_wait(
+        self,
+        args: List[str],
+        *,
+        env: Optional[Dict[str, str]] = None,
+    ) -> int:
+        process = self.run_command(args, env=env)
+        return self.wait_and_print_command_output(process)
+
+    def run_nodes(self) -> None:
+        nodes = [
+            Node(
+                package='test_tracetools',
+                executable='test_ping',
+                output='screen',
+            ),
+            Node(
+                package='test_tracetools',
+                executable='test_pong',
+                output='screen',
+            ),
+        ]
+        ld = LaunchDescription(nodes)
+        ls = LaunchService()
+        ls.include_launch_description(ld)
+        exit_code = ls.run()
+        self.assertEqual(0, exit_code)
+
+    def test_process_bad_input_path(self) -> None:
+        tmpdir = self.create_test_tmpdir('test_process_bad_input_path')
+
+        # No input path
+        ret = self.run_command_and_wait(['ros2', 'trace-analysis', 'process'])
+        self.assertEqual(2, ret)
+
+        # Does not exist
+        ret = self.run_command_and_wait(['ros2', 'trace-analysis', 'process', ''])
+        self.assertEqual(1, ret)
+        fake_input = os.path.join(tmpdir, 'doesnt_exist')
+        ret = self.run_command_and_wait(['ros2', 'trace-analysis', 'process', fake_input])
+        self.assertEqual(1, ret)
+
+        # Exists but empty
+        empty_input = os.path.join(tmpdir, 'empty')
+        os.mkdir(empty_input)
+        ret = self.run_command_and_wait(['ros2', 'trace-analysis', 'process', empty_input])
+        self.assertEqual(1, ret)
+
+        # Exists but converted file empty
+        empty_converted_file = os.path.join(empty_input, 'converted')
+        Path(empty_converted_file).touch()
+        ret = self.run_command_and_wait(['ros2', 'trace-analysis', 'process', empty_input])
+        self.assertEqual(1, ret)
+
+        shutil.rmtree(tmpdir)
+
+    @unittest.skipIf(not are_tracepoints_included(), 'tracepoints are required')
+    def test_process(self) -> None:
+        tmpdir = self.create_test_tmpdir('test_process')
+        session_name = 'test_process'
+
+        # Run and trace nodes
+        ret = self.run_command_and_wait(
+            [
+                'ros2', 'trace',
+                'start', session_name,
+                '--path', tmpdir,
+            ],
+        )
+        self.assertEqual(0, ret)
+        trace_dir = os.path.join(tmpdir, session_name)
+        self.run_nodes()
+        ret = self.run_command_and_wait(['ros2', 'trace', 'stop', session_name])
+        self.assertEqual(0, ret)
+
+        # Process trace
+        ret = self.run_command_and_wait(['ros2', 'trace-analysis', 'process', trace_dir])
+        self.assertEqual(0, ret)
+
+        # Check that converted file exists and isn't empty
+        converted_file = os.path.join(trace_dir, 'converted')
+        self.assertTrue(os.path.isfile(converted_file))
+        self.assertGreater(os.path.getsize(converted_file), 0)
+
+        shutil.rmtree(tmpdir)

test_ros2trace_analysis/test/test_xmllint.py

@@ -0,0 +1,23 @@
+# Copyright 2019 Open Source Robotics Foundation, Inc.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+from ament_xmllint.main import main
+import pytest
+
+
+@pytest.mark.linter
+@pytest.mark.xmllint
+def test_xmllint():
+    rc = main(argv=[])
+    assert rc == 0, 'Found errors'

tracetools_analysis/CHANGELOG.rst

@@ -2,6 +2,40 @@
 Changelog for package tracetools_analysis
 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
 
+3.1.0 (2024-06-15)
+------------------
+* Use tracepoint names from tracetools_trace and add tests (`#25 <https://github.com/ros-tracing/tracetools_analysis/issues/25>`_)
+* Use underscores in setup.cfg (`#21 <https://github.com/ros-tracing/tracetools_analysis/issues/21>`_)
+* Skip TestDataModelUtil.test_convert_time_columns if pandas < 2.2.0 (`#20 <https://github.com/ros-tracing/tracetools_analysis/issues/20>`_)
+* Fix warnings when using mypy>=1.8.0 (`#16 <https://github.com/ros-tracing/tracetools_analysis/issues/16>`_)
+* Support traces with multiple callbacks for same pointer (`#13 <https://github.com/ros-tracing/tracetools_analysis/issues/13>`_) (`#15 <https://github.com/ros-tracing/tracetools_analysis/issues/15>`_)
+* Update path to ros2_tracing in notebooks (`#8 <https://github.com/ros-tracing/tracetools_analysis/issues/8>`_)
+* Refactored for compatibility with Bokeh 3.2.0 (`#7 <https://github.com/ros-tracing/tracetools_analysis/issues/7>`_)
+* Fix mypy errors (`#4 <https://github.com/ros-tracing/tracetools_analysis/issues/4>`_)
+* Contributors: Christophe Bedard, Oren Bell
+
+3.0.0 (2022-01-21)
+------------------
+* Update context_fields option name in profile example launch file
+* Fix both rcl and rmw subscriptions being added to the rcl dataframe
+* Support rmw pub/sub init and take instrumentation
+* Support publishing instrumentation
+* Change 'input_path' arg help message wording
+* Add 'process --convert-only' option
+* Deprecate 'convert' verb since it is just an implementation detail
+* Simplify jupyter notebooks and add way to use Debian packages
+* Contributors: Christophe Bedard
+
+2.0.0 (2021-03-31)
+------------------
+* Set callback_instances' timestamp & duration cols to datetime/timedelta
+* Improve performance by using lists of dicts as intermediate storage & converting to dataframes at the end
+* Update callback_duration notebook and pingpong sample data
+* Support instrumentation for linking a timer to a node
+* Disable kernel tracing for pingpong example launchfile
+* Support lifecycle node state transition instrumentation
+* Contributors: Christophe Bedard
+
 1.0.0 (2020-06-02)
 ------------------
 * Add sphinx documentation for tracetools_analysis

tracetools_analysis/analysis/lifecycle_states.ipynb

@@ -0,0 +1,167 @@
+{
+ "cells": [
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "# Lifecycle node states\n",
+    "#\n",
+    "# Get trace data using the provided launch file:\n",
+    "#    $ ros2 launch tracetools_analysis lifecycle_states.launch.py"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "path = '~/.ros/tracing/lifecycle-node-state/'"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "import sys\n",
+    "# Add paths to tracetools_analysis and tracetools_read.\n",
+    "# There are two options:\n",
+    "#   1. from source, assuming a workspace with:\n",
+    "#       src/tracetools_analysis/\n",
+    "#       src/ros2/ros2_tracing/tracetools_read/\n",
+    "sys.path.insert(0, '../')\n",
+    "sys.path.insert(0, '../../../ros2/ros2_tracing/tracetools_read/')\n",
+    "#   2. from Debian packages, setting the right ROS 2 distro:\n",
+    "#ROS_DISTRO = 'rolling'\n",
+    "#sys.path.insert(0, f'/opt/ros/{ROS_DISTRO}/lib/python3.8/site-packages')\n",
+    "import datetime as dt\n",
+    "\n",
+    "from bokeh.palettes import Category10\n",
+    "from bokeh.plotting import figure\n",
+    "from bokeh.plotting import output_notebook\n",
+    "from bokeh.io import show\n",
+    "from bokeh.layouts import row\n",
+    "from bokeh.models import ColumnDataSource\n",
+    "from bokeh.models import DatetimeTickFormatter\n",
+    "from bokeh.models import PrintfTickFormatter\n",
+    "import numpy as np\n",
+    "import pandas as pd\n",
+    "\n",
+    "from tracetools_analysis.loading import load_file\n",
+    "from tracetools_analysis.processor.ros2 import Ros2Handler\n",
+    "from tracetools_analysis.utils.ros2 import Ros2DataModelUtil"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "# Process\n",
+    "events = load_file(path)\n",
+    "handler = Ros2Handler.process(events)\n",
+    "#handler.data.print_data()"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "data_util = Ros2DataModelUtil(handler.data)\n",
+    "\n",
+    "state_intervals = data_util.get_lifecycle_node_state_intervals()\n",
+    "for handle, states in state_intervals.items():\n",
+    "    print(handle)\n",
+    "    print(states.to_string())\n",
+    "\n",
+    "output_notebook()\n",
+    "psize = 450"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "# Plot\n",
+    "colors = Category10[10]\n",
+    "\n",
+    "lifecycle_node_names = {\n",
+    "    handle: data_util.get_lifecycle_node_handle_info(handle)['lifecycle node'] for handle in state_intervals.keys()\n",
+    "}\n",
+    "states_labels = []\n",
+    "start_times = []\n",
+    "\n",
+    "fig = figure(\n",
+    "    y_range=list(lifecycle_node_names.values()),\n",
+    "    title='Lifecycle states over time',\n",
+    "    y_axis_label='node',\n",
+    "    plot_width=psize*2, plot_height=psize,\n",
+    ")\n",
+    "\n",
+    "for lifecycle_node_handle, states in state_intervals.items():\n",
+    "    lifecycle_node_name = lifecycle_node_names[lifecycle_node_handle]\n",
+    "\n",
+    "    start_times.append(states['start_timestamp'].iloc[0])\n",
+    "    for index, row in states.iterrows():\n",
+    "        # TODO fix end\n",
+    "        if index == max(states.index):\n",
+    "            continue\n",
+    "        start = row['start_timestamp']\n",
+    "        end = row['end_timestamp']\n",
+    "        state = row['state']\n",
+    "        if state not in states_labels:\n",
+    "            states_labels.append(state)\n",
+    "        state_index = states_labels.index(state)\n",
+    "        fig.line(\n",
+    "            x=[start, end],\n",
+    "            y=[lifecycle_node_name]*2,\n",
+    "            line_width=10.0,\n",
+    "            line_color=colors[state_index],\n",
+    "            legend_label=state,\n",
+    "        )\n",
+    "\n",
+    "fig.title.align = 'center'\n",
+    "fig.xaxis[0].formatter = DatetimeTickFormatter(seconds=['%Ss'])\n",
+    "fig.xaxis[0].axis_label = 'time (' + min(start_times).strftime('%Y-%m-%d %H:%M') + ')'\n",
+    "show(fig)"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": []
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Python 3 (ipykernel)",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.10.6"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 2
+}

tracetools_analysis/analysis/memory_usage.ipynb

@@ -10,10 +10,7 @@
     "#\n",
     "# Get trace data using the provided launch file:\n",
     "#    $ ros2 launch tracetools_analysis memory_usage.launch.py\n",
-    "#    (wait a few seconds, then kill with Ctrl+C)\n",
-    "#\n",
-    "# (optional) convert trace data:\n",
-    "#    $ ros2 trace-analysis convert ~/.ros/tracing/memory-usage"
+    "#    (wait at least a few seconds, then kill with Ctrl+C)"
    ]
   },
   {
@@ -32,11 +29,16 @@
    "outputs": [],
    "source": [
     "import sys\n",
-    "# Assuming a workspace with:\n",
-    "#   src/tracetools_analysis/\n",
-    "#   src/micro-ROS/ros_tracing/ros2_tracing/tracetools_read/\n",
+    "# Add paths to tracetools_analysis and tracetools_read.\n",
+    "# There are two options:\n",
+    "#   1. from source, assuming a workspace with:\n",
+    "#       src/tracetools_analysis/\n",
+    "#       src/ros2/ros2_tracing/tracetools_read/\n",
     "sys.path.insert(0, '../')\n",
-    "sys.path.insert(0, '../../../micro-ROS/ros_tracing/ros2_tracing/tracetools_read/')\n",
+    "sys.path.insert(0, '../../../ros2/ros2_tracing/tracetools_read/')\n",
+    "#   2. from Debian packages, setting the right ROS 2 distro:\n",
+    "#ROS_DISTRO = 'rolling'\n",
+    "#sys.path.insert(0, f'/opt/ros/{ROS_DISTRO}/lib/python3.8/site-packages')\n",
     "import datetime as dt\n",
     "\n",
     "from bokeh.palettes import viridis\n",
@@ -151,7 +153,7 @@
  ],
  "metadata": {
   "kernelspec": {
-   "display_name": "Python 3",
+   "display_name": "Python 3 (ipykernel)",
    "language": "python",
    "name": "python3"
   },
@@ -165,7 +167,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.6.9"
+   "version": "3.10.6"
   }
  },
  "nbformat": 4,

tracetools_analysis/docs/source/about.rst

@@ -1,4 +1,4 @@
 About
 =====
 
-Tools for analyzing trace data from ROS 2 systems generated by the `ros2_tracing packages <https://index.ros.org/r/ros2_tracing/gitlab-micro-ROS-ros_tracing-ros2_tracing/>`_.
+Tools for analyzing trace data from ROS 2 systems generated by the `ros2_tracing packages <https://index.ros.org/r/ros2_tracing/>`_.

tracetools_analysis/docs/source/api/tracetools_analysis.rst

@@ -1,6 +1,8 @@
 tracetools_analysis
 ===================
 
+.. automodule:: tracetools_analysis
+
 loading
 #######
 

tracetools_analysis/docs/source/conf.py

@@ -39,9 +39,9 @@ copyright = '2019-2020, Robert Bosch GmbH & Christophe Bedard'  # noqa
 author = 'Robert Bosch GmbH, Christophe Bedard'
 
 # The short X.Y version
-version = os.environ.get('SPHINX_VERSION_SHORT', '')
+version = ''
 # The full version, including alpha/beta/rc tags
-release = os.environ.get('SPHINX_VERSION_FULL', '')
+release = '1.0.1'
 
 
 # -- General configuration ---------------------------------------------------
@@ -100,7 +100,9 @@ html_theme = 'alabaster'
 # further.  For a list of options available for each theme, see the
 # documentation.
 #
-# html_theme_options = {}
+html_theme_options = {
+    'sidebar_width': '260px',
+}
 
 # Add any paths that contain custom static files (such as style sheets) here,
 # relative to this directory. They are copied after the builtin static files,

tracetools_analysis/docs/source/index.rst

@@ -1,7 +1,7 @@
 tracetools_analysis
 ===================
 
-tracetools_analysis provides tools for analyzing trace data from ROS 2 systems generated by the `ros2_tracing packages <https://index.ros.org/r/ros2_tracing/gitlab-micro-ROS-ros_tracing-ros2_tracing/>`_.
+tracetools_analysis provides tools for analyzing trace data from ROS 2 systems generated by the `ros2_tracing packages <https://index.ros.org/r/ros2_tracing/>`_.
 
 .. toctree::
    :maxdepth: 4

tracetools_analysis/launch/lifecycle_states.launch.py

@@ -0,0 +1,38 @@
+# Copyright 2020 Christophe Bedard
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+"""Example launch file for a lifecycle node state analysis."""
+
+import launch
+from launch_ros.actions import Node
+from tracetools_launch.action import Trace
+
+
+def generate_launch_description():
+    return launch.LaunchDescription([
+        Trace(
+            session_name='lifecycle-node-state',
+            events_kernel=[],
+        ),
+        Node(
+            package='test_tracetools',
+            executable='test_lifecycle_node',
+            output='screen',
+        ),
+        Node(
+            package='test_tracetools',
+            executable='test_lifecycle_client',
+            output='screen',
+        ),
+    ])

tracetools_analysis/launch/memory_usage.launch.py

@@ -14,14 +14,14 @@
 
 """Example launch file for a memory_usage analysis."""
 
-from launch import LaunchDescription
+import launch
 from launch_ros.actions import Node
 from tracetools_launch.action import Trace
 from tracetools_trace.tools.names import DEFAULT_EVENTS_ROS
 
 
 def generate_launch_description():
-    return LaunchDescription([
+    return launch.LaunchDescription([
         Trace(
             session_name='memory-usage',
             events_ust=[
@@ -38,13 +38,13 @@ def generate_launch_description():
             ],
         ),
         Node(
-            package='tracetools_test',
+            package='test_tracetools',
             executable='test_ping',
             arguments=['do_more'],
             output='screen',
         ),
         Node(
-            package='tracetools_test',
+            package='test_tracetools',
             executable='test_pong',
             arguments=['do_more'],
             output='screen',

tracetools_analysis/launch/pingpong.launch.py

@@ -14,24 +14,25 @@
 
 """Example launch file for a callback duration analysis."""
 
-from launch import LaunchDescription
+import launch
 from launch_ros.actions import Node
 from tracetools_launch.action import Trace
 
 
 def generate_launch_description():
-    return LaunchDescription([
+    return launch.LaunchDescription([
         Trace(
             session_name='pingpong',
+            events_kernel=[],
         ),
         Node(
-            package='tracetools_test',
+            package='test_tracetools',
             executable='test_ping',
             arguments=['do_more'],
             output='screen',
         ),
         Node(
-            package='tracetools_test',
+            package='test_tracetools',
             executable='test_pong',
             arguments=['do_more'],
             output='screen',

tracetools_analysis/launch/profile.launch.py

@@ -14,7 +14,7 @@
 
 """Example launch file for a profiling analysis."""
 
-from launch import LaunchDescription
+import launch
 from launch_ros.actions import Node
 from tracetools_launch.action import Trace
 from tracetools_trace.tools.names import DEFAULT_CONTEXT
@@ -22,7 +22,7 @@ from tracetools_trace.tools.names import DEFAULT_EVENTS_ROS
 
 
 def generate_launch_description():
-    return LaunchDescription([
+    return launch.LaunchDescription([
         Trace(
             session_name='profile',
             events_ust=[
@@ -36,18 +36,19 @@ def generate_launch_description():
             events_kernel=[
                 'sched_switch',
             ],
-            context_names=[
-                'ip',
-            ] + DEFAULT_CONTEXT,
+            context_fields={
+                'kernel': DEFAULT_CONTEXT,
+                'userspace': DEFAULT_CONTEXT + ['ip'],
+            },
         ),
         Node(
-            package='tracetools_test',
+            package='test_tracetools',
             executable='test_ping',
             arguments=['do_more'],
             output='screen',
         ),
         Node(
-            package='tracetools_test',
+            package='test_tracetools',
             executable='test_pong',
             arguments=['do_more'],
             output='screen',

tracetools_analysis/package.xml

@@ -2,15 +2,19 @@
 <?xml-model href="http://download.ros.org/schema/package_format2.xsd" schematypens="http://www.w3.org/2001/XMLSchema"?>
 <package format="2">
   <name>tracetools_analysis</name>
-  <version>1.0.1</version>
+  <version>3.1.0</version>
   <description>Tools for analysing trace data.</description>
   <maintainer email="bedard.christophe@gmail.com">Christophe Bedard</maintainer>
   <maintainer email="ingo.luetkebohle@de.bosch.com">Ingo Lütkebohle</maintainer>
   <license>Apache 2.0</license>
+  <url type="website">https://index.ros.org/p/tracetools_analysis/</url>
+  <url type="repository">https://github.com/ros-tracing/tracetools_analysis</url>
+  <url type="bugtracker">https://github.com/ros-tracing/tracetools_analysis/issues</url>
   <author email="ingo.luetkebohle@de.bosch.com">Ingo Lütkebohle</author>
   <author email="fixed-term.christophe.bourquebedard@de.bosch.com">Christophe Bedard</author>
 
   <depend>tracetools_read</depend>
+  <depend>tracetools_trace</depend>
   <depend>python3-pandas</depend>
 
   <exec_depend>jupyter-notebook</exec_depend>

tracetools_analysis/setup.cfg

@@ -1,4 +1,4 @@
 [develop]
-script-dir=$base/lib/tracetools_analysis
+script_dir=$base/lib/tracetools_analysis
 [install]
-install-scripts=$base/lib/tracetools_analysis
+install_scripts=$base/lib/tracetools_analysis

tracetools_analysis/setup.py

@@ -7,7 +7,7 @@ package_name = 'tracetools_analysis'
 
 setup(
     name=package_name,
-    version='1.0.1',
+    version='3.1.0',
     packages=find_packages(exclude=['test']),
     data_files=[
         ('share/' + package_name, ['package.xml']),
@@ -32,7 +32,7 @@ setup(
         'fixed-term.christophe.bourquebedard@de.bosch.com, '
         'ingo.luetkebohle@de.bosch.com'
     ),
-    url='https://gitlab.com/micro-ROS/ros_tracing/tracetools_analysis',
+    url='https://github.com/ros-tracing/tracetools_analysis',
     keywords=[],
     description='Tools for analysing trace data.',
     long_description=(

tracetools_analysis/test/test_flake8.py

@@ -12,12 +12,14 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 
-from ament_flake8.main import main
+from ament_flake8.main import main_with_errors
 import pytest
 
 
 @pytest.mark.flake8
 @pytest.mark.linter
 def test_flake8():
-    rc = main(argv=[])
-    assert rc == 0, 'Found errors'
+    rc, errors = main_with_errors(argv=[])
+    assert rc == 0, \
+        'Found %d code style errors / warnings:\n' % len(errors) + \
+        '\n'.join(errors)

tracetools_analysis/test/tracetools_analysis/test_data_model_util.py

@@ -17,8 +17,10 @@ from datetime import timezone
 from typing import Dict
 import unittest
 
+from packaging.version import Version
+from pandas import __version__ as pandas_version
 from pandas import DataFrame
-from pandas.util.testing import assert_frame_equal
+from pandas.testing import assert_frame_equal
 
 from tracetools_analysis.data_model import DataModel
 from tracetools_analysis.processor import EventHandler
@@ -34,6 +36,10 @@ class TestDataModelUtil(unittest.TestCase):
             *args,
         )
 
+    @unittest.skipIf(
+        Version(pandas_version) < Version('2.2.0'),
+        'skip due to missing fix: pandas-dev/pandas#55812',
+    )
     def test_convert_time_columns(self) -> None:
         input_df = DataFrame(
             data=[

tracetools_analysis/test/tracetools_analysis/test_profile_handler.py

@@ -18,7 +18,7 @@ from typing import List
 import unittest
 
 from pandas import DataFrame
-from pandas.util.testing import assert_frame_equal
+from pandas.testing import assert_frame_equal
 
 from tracetools_analysis.processor import Processor
 from tracetools_analysis.processor.profile import ProfileHandler
@@ -286,17 +286,8 @@ class TestProfileHandler(unittest.TestCase):
 
     @staticmethod
     def build_expected_df(expected_data: List[Dict[str, Any]]) -> DataFrame:
-        # Make sure the columns are in the same order
-        expected_df = DataFrame(columns=[
-            'tid',
-            'depth',
-            'function_name',
-            'parent_name',
-            'start_timestamp',
-            'duration',
-            'actual_duration',
-        ])
-        return expected_df.append(expected_data, ignore_index=True)
+        # Columns should be in the same order
+        return DataFrame.from_dict(expected_data)
 
     @staticmethod
     def transform_fake_fields(events: List[DictEvent]) -> None:

tracetools_analysis/test/tracetools_analysis/test_utils.py

@@ -16,6 +16,8 @@
 import unittest
 
 from tracetools_analysis import time_diff_to_str
+from tracetools_analysis.data_model.ros2 import Ros2DataModel
+from tracetools_analysis.utils.ros2 import Ros2DataModelUtil
 
 
 class TestUtils(unittest.TestCase):
@@ -31,3 +33,15 @@ class TestUtils(unittest.TestCase):
         self.assertEqual('1 m 10 s', time_diff_to_str(69.6969))
         self.assertEqual('6 m 10 s', time_diff_to_str(369.6969))
         self.assertEqual('2 m 0 s', time_diff_to_str(120.499999999))
+
+    def test_ros2_no_callbacks(self) -> None:
+        data_model = Ros2DataModel()
+        data_model.finalize()
+        util = Ros2DataModelUtil(data_model)
+        self.assertEqual({}, util.get_callback_symbols())
+
+    def test_ros2_no_lifecycle_transitions(self) -> None:
+        data_model = Ros2DataModel()
+        data_model.finalize()
+        util = Ros2DataModelUtil(data_model)
+        self.assertEqual({}, util.get_lifecycle_node_state_intervals())

tracetools_analysis/tracetools_analysis/convert.py

@@ -41,7 +41,11 @@ def add_args(parser: argparse.ArgumentParser) -> None:
 
 def parse_args() -> argparse.Namespace:
     parser = argparse.ArgumentParser(
-        description='Convert trace data to a file.')
+        description=(
+            'Convert trace data to a file. '
+            "DEPRECATED: use the 'process' verb directly."
+        ),
+    )
     add_args(parser)
     return parser.parse_args()
 
@@ -79,4 +83,6 @@ def main():
     trace_directory = args.trace_directory
     output_file_name = args.output_file_name
 
+    import warnings
+    warnings.warn("'convert' is deprecated, use 'process' directly instead", stacklevel=2)
     convert(trace_directory, output_file_name)

tracetools_analysis/tracetools_analysis/data_model/__init__.py

@@ -1,4 +1,5 @@
 # Copyright 2019 Robert Bosch GmbH
+# Copyright 2021 Christophe Bedard
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.
@@ -14,17 +15,46 @@
 
 """Base data model module."""
 
+from typing import Any
+from typing import Dict
+from typing import List
+
+
+DataModelIntermediateStorage = List[Dict[str, Any]]
+
 
 class DataModel():
     """
     Container with pre-processed data for an analysis to use.
 
     Contains data for an analysis to use. This is a middleground between trace events data and the
-    output data of an analysis. It uses pandas `DataFrame` directly.
+    output data of an analysis.
+    It uses native/simple Python data structures (e.g. lists of dicts) during processing, but
+    converts them to pandas `DataFrame` at the end.
     """
 
     def __init__(self) -> None:
-        pass
+        self._finalized = False
+
+    def finalize(self) -> None:
+        """
+        Finalize the data model.
+
+        Call this once data is done being generated or added to the model.
+        Finalization tasks are up to the inheriting/concrete class.
+        """
+        # Avoid calling it twice for data models which might be shared
+        if not self._finalized:
+            self._finalized = True
+            self._finalize()
+
+    def _finalize(self) -> None:
+        """
+        Do the finalization.
+
+        Only called once.
+        """
+        raise NotImplementedError
 
     def print_data(self) -> None:
         """Print the data model."""

tracetools_analysis/tracetools_analysis/data_model/cpu_time.py

@@ -1,4 +1,5 @@
 # Copyright 2019 Robert Bosch GmbH
+# Copyright 2021 Christophe Bedard
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.
@@ -17,6 +18,7 @@
 import pandas as pd
 
 from . import DataModel
+from . import DataModelIntermediateStorage
 
 
 class CpuTimeDataModel(DataModel):
@@ -29,12 +31,7 @@ class CpuTimeDataModel(DataModel):
     def __init__(self) -> None:
         """Create a CpuTimeDataModel."""
         super().__init__()
-        self.times = pd.DataFrame(columns=[
-            'tid',
-            'start_timestamp',
-            'duration',
-            'cpu_id',
-        ])
+        self._times: DataModelIntermediateStorage = []
 
     def add_duration(
         self,
@@ -43,13 +40,15 @@ class CpuTimeDataModel(DataModel):
         duration: int,
         cpu_id: int,
     ) -> None:
-        data = {
+        self._times.append({
             'tid': tid,
             'start_timestamp': start_timestamp,
             'duration': duration,
             'cpu_id': cpu_id,
-        }
-        self.times = self.times.append(data, ignore_index=True)
+        })
+
+    def _finalize(self) -> None:
+        self.times = pd.DataFrame.from_dict(self._times)
 
     def print_data(self) -> None:
         print('====================CPU TIME DATA MODEL====================')

tracetools_analysis/tracetools_analysis/data_model/memory_usage.py

@@ -1,4 +1,5 @@
 # Copyright 2019 Apex.AI, Inc.
+# Copyright 2021 Christophe Bedard
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.
@@ -17,6 +18,7 @@
 import pandas as pd
 
 from . import DataModel
+from . import DataModelIntermediateStorage
 
 
 class MemoryUsageDataModel(DataModel):
@@ -30,11 +32,7 @@ class MemoryUsageDataModel(DataModel):
     def __init__(self) -> None:
         """Create a MemoryUsageDataModel."""
         super().__init__()
-        self.memory_diff = pd.DataFrame(columns=[
-            'timestamp',
-            'tid',
-            'memory_diff',
-        ])
+        self._memory_diff: DataModelIntermediateStorage = []
 
     def add_memory_difference(
         self,
@@ -42,12 +40,14 @@ class MemoryUsageDataModel(DataModel):
         tid: int,
         memory_diff: int,
     ) -> None:
-        data = {
+        self._memory_diff.append({
             'timestamp': timestamp,
             'tid': tid,
             'memory_diff': memory_diff,
-        }
-        self.memory_diff = self.memory_diff.append(data, ignore_index=True)
+        })
+
+    def _finalize(self) -> None:
+        self.memory_diff = pd.DataFrame.from_dict(self._memory_diff)
 
     def print_data(self) -> None:
         print('==================MEMORY USAGE DATA MODEL==================')

tracetools_analysis/tracetools_analysis/data_model/profile.py

@@ -1,4 +1,5 @@
 # Copyright 2019 Robert Bosch GmbH
+# Copyright 2021 Christophe Bedard
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.
@@ -19,6 +20,7 @@ from typing import Optional
 import pandas as pd
 
 from . import DataModel
+from . import DataModelIntermediateStorage
 
 
 class ProfileDataModel(DataModel):
@@ -32,15 +34,7 @@ class ProfileDataModel(DataModel):
     def __init__(self) -> None:
         """Create a ProfileDataModel."""
         super().__init__()
-        self.times = pd.DataFrame(columns=[
-            'tid',
-            'depth',
-            'function_name',
-            'parent_name',
-            'start_timestamp',
-            'duration',
-            'actual_duration',
-        ])
+        self._times: DataModelIntermediateStorage = []
 
     def add_duration(
         self,
@@ -52,7 +46,7 @@ class ProfileDataModel(DataModel):
         duration: int,
         actual_duration: int,
     ) -> None:
-        data = {
+        self._times.append({
             'tid': tid,
             'depth': depth,
             'function_name': function_name,
@@ -60,8 +54,10 @@ class ProfileDataModel(DataModel):
             'start_timestamp': start_timestamp,
             'duration': duration,
             'actual_duration': actual_duration,
-        }
-        self.times = self.times.append(data, ignore_index=True)
+        })
+
+    def _finalize(self) -> None:
+        self.times = pd.DataFrame.from_dict(self._times)
 
     def print_data(self) -> None:
         print('====================PROFILE DATA MODEL====================')

tracetools_analysis/tracetools_analysis/data_model/ros2.py

@@ -1,4 +1,5 @@
 # Copyright 2019 Robert Bosch GmbH
+# Copyright 2020-2021 Christophe Bedard
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.
@@ -14,9 +15,11 @@
 
 """Module for ROS 2 data model."""
 
+import numpy as np
 import pandas as pd
 
 from . import DataModel
+from . import DataModelIntermediateStorage
 
 
 class Ros2DataModel(DataModel):
@@ -30,129 +33,296 @@ class Ros2DataModel(DataModel):
         """Create a Ros2DataModel."""
         super().__init__()
         # Objects (one-time events, usually when something is created)
-        self.contexts = pd.DataFrame(columns=['context_handle',
-                                              'timestamp',
-                                              'pid',
-                                              'version'])
-        self.contexts.set_index(['context_handle'], inplace=True, drop=True)
-        self.nodes = pd.DataFrame(columns=['node_handle',
-                                           'timestamp',
-                                           'tid',
-                                           'rmw_handle',
-                                           'name',
-                                           'namespace'])
-        self.nodes.set_index(['node_handle'], inplace=True, drop=True)
-        self.publishers = pd.DataFrame(columns=['publisher_handle',
-                                                'timestamp',
-                                                'node_handle',
-                                                'rmw_handle',
-                                                'topic_name',
-                                                'depth'])
-        self.publishers.set_index(['publisher_handle'], inplace=True, drop=True)
-        self.subscriptions = pd.DataFrame(columns=['subscription_handle',
-                                                   'timestamp',
-                                                   'node_handle',
-                                                   'rmw_handle',
-                                                   'topic_name',
-                                                   'depth'])
-        self.subscriptions.set_index(['subscription_handle'], inplace=True, drop=True)
-        self.subscription_objects = pd.DataFrame(columns=['subscription',
-                                                          'timestamp',
-                                                          'subscription_handle'])
-        self.subscription_objects.set_index(['subscription'], inplace=True, drop=True)
-        self.services = pd.DataFrame(columns=['service_handle',
-                                              'timestamp',
-                                              'node_handle',
-                                              'rmw_handle',
-                                              'service_name'])
-        self.services.set_index(['service_handle'], inplace=True, drop=True)
-        self.clients = pd.DataFrame(columns=['client_handle',
-                                             'timestamp',
-                                             'node_handle',
-                                             'rmw_handle',
-                                             'service_name'])
-        self.clients.set_index(['client_handle'], inplace=True, drop=True)
-        self.timers = pd.DataFrame(columns=['timer_handle',
-                                            'timestamp',
-                                            'period',
-                                            'tid'])
-        self.timers.set_index(['timer_handle'], inplace=True, drop=True)
-
-        self.callback_objects = pd.DataFrame(columns=['reference',
-                                                      'timestamp',
-                                                      'callback_object'])
-        self.callback_objects.set_index(['reference'], inplace=True, drop=True)
-        self.callback_symbols = pd.DataFrame(columns=['callback_object',
-                                                      'timestamp',
-                                                      'symbol'])
-        self.callback_symbols.set_index(['callback_object'], inplace=True, drop=True)
-
+        self._contexts: DataModelIntermediateStorage = []
+        self._nodes: DataModelIntermediateStorage = []
+        self._rmw_publishers: DataModelIntermediateStorage = []
+        self._rcl_publishers: DataModelIntermediateStorage = []
+        self._rmw_subscriptions: DataModelIntermediateStorage = []
+        self._rcl_subscriptions: DataModelIntermediateStorage = []
+        self._subscription_objects: DataModelIntermediateStorage = []
+        self._services: DataModelIntermediateStorage = []
+        self._clients: DataModelIntermediateStorage = []
+        self._timers: DataModelIntermediateStorage = []
+        self._timer_node_links: DataModelIntermediateStorage = []
+        self._callback_objects: DataModelIntermediateStorage = []
+        self._callback_symbols: DataModelIntermediateStorage = []
+        self._lifecycle_state_machines: DataModelIntermediateStorage = []
         # Events (multiple instances, may not have a meaningful index)
-        self.callback_instances = pd.DataFrame(columns=['callback_object',
-                                                        'timestamp',
-                                                        'duration',
-                                                        'intra_process'])
+        self._rclcpp_publish_instances: DataModelIntermediateStorage = []
+        self._rcl_publish_instances: DataModelIntermediateStorage = []
+        self._rmw_publish_instances: DataModelIntermediateStorage = []
+        self._rmw_take_instances: DataModelIntermediateStorage = []
+        self._rcl_take_instances: DataModelIntermediateStorage = []
+        self._rclcpp_take_instances: DataModelIntermediateStorage = []
+        self._callback_instances: DataModelIntermediateStorage = []
+        self._lifecycle_transitions: DataModelIntermediateStorage = []
 
     def add_context(
         self, context_handle, timestamp, pid, version
     ) -> None:
-        self.contexts.loc[context_handle] = [timestamp, pid, version]
+        self._contexts.append({
+            'context_handle': context_handle,
+            'timestamp': timestamp,
+            'pid': pid,
+            'version': version,
+        })
 
     def add_node(
         self, node_handle, timestamp, tid, rmw_handle, name, namespace
     ) -> None:
-        self.nodes.loc[node_handle] = [timestamp, tid, rmw_handle, name, namespace]
+        self._nodes.append({
+            'node_handle': node_handle,
+            'timestamp': timestamp,
+            'tid': tid,
+            'rmw_handle': rmw_handle,
+            'name': name,
+            'namespace': namespace,
+        })
 
-    def add_publisher(
+    def add_rmw_publisher(
+        self, handle, timestamp, gid,
+    ) -> None:
+        self._rmw_publishers.append({
+            'publisher_handle': handle,
+            'timestamp': timestamp,
+            'gid': gid,
+        })
+
+    def add_rcl_publisher(
         self, handle, timestamp, node_handle, rmw_handle, topic_name, depth
     ) -> None:
-        self.publishers.loc[handle] = [timestamp, node_handle, rmw_handle, topic_name, depth]
+        self._rcl_publishers.append({
+            'publisher_handle': handle,
+            'timestamp': timestamp,
+            'node_handle': node_handle,
+            'rmw_handle': rmw_handle,
+            'topic_name': topic_name,
+            'depth': depth,
+        })
+
+    def add_rclcpp_publish_instance(
+        self, timestamp, message,
+    ) -> None:
+        self._rclcpp_publish_instances.append({
+            'timestamp': timestamp,
+            'message': message,
+        })
+
+    def add_rcl_publish_instance(
+        self, publisher_handle, timestamp, message,
+    ) -> None:
+        self._rcl_publish_instances.append({
+            'publisher_handle': publisher_handle,
+            'timestamp': timestamp,
+            'message': message,
+        })
+
+    def add_rmw_publish_instance(
+        self, timestamp, message,
+    ) -> None:
+        self._rmw_publish_instances.append({
+            'timestamp': timestamp,
+            'message': message,
+        })
+
+    def add_rmw_subscription(
+        self, handle, timestamp, gid
+    ) -> None:
+        self._rmw_subscriptions.append({
+            'subscription_handle': handle,
+            'timestamp': timestamp,
+            'gid': gid,
+        })
 
     def add_rcl_subscription(
         self, handle, timestamp, node_handle, rmw_handle, topic_name, depth
     ) -> None:
-        self.subscriptions.loc[handle] = [timestamp, node_handle, rmw_handle, topic_name, depth]
+        self._rcl_subscriptions.append({
+            'subscription_handle': handle,
+            'timestamp': timestamp,
+            'node_handle': node_handle,
+            'rmw_handle': rmw_handle,
+            'topic_name': topic_name,
+            'depth': depth,
+        })
 
     def add_rclcpp_subscription(
         self, subscription_pointer, timestamp, subscription_handle
     ) -> None:
-        self.subscription_objects.loc[subscription_pointer] = [timestamp, subscription_handle]
+        self._subscription_objects.append({
+            'subscription': subscription_pointer,
+            'timestamp': timestamp,
+            'subscription_handle': subscription_handle,
+        })
 
     def add_service(
         self, handle, timestamp, node_handle, rmw_handle, service_name
     ) -> None:
-        self.services.loc[handle] = [timestamp, node_handle, rmw_handle, service_name]
+        self._services.append({
+            'service_handle': timestamp,
+            'timestamp': timestamp,
+            'node_handle': node_handle,
+            'rmw_handle': rmw_handle,
+            'service_name': service_name,
+        })
 
     def add_client(
         self, handle, timestamp, node_handle, rmw_handle, service_name
     ) -> None:
-        self.clients.loc[handle] = [timestamp, node_handle, rmw_handle, service_name]
+        self._clients.append({
+            'client_handle': handle,
+            'timestamp': timestamp,
+            'node_handle': node_handle,
+            'rmw_handle': rmw_handle,
+            'service_name': service_name,
+        })
 
     def add_timer(
         self, handle, timestamp, period, tid
     ) -> None:
-        self.timers.loc[handle] = [timestamp, period, tid]
+        self._timers.append({
+            'timer_handle': handle,
+            'timestamp': timestamp,
+            'period': period,
+            'tid': tid,
+        })
+
+    def add_timer_node_link(
+        self, handle, timestamp, node_handle
+    ) -> None:
+        self._timer_node_links.append({
+            'timer_handle': handle,
+            'timestamp': timestamp,
+            'node_handle': node_handle,
+        })
 
     def add_callback_object(
         self, reference, timestamp, callback_object
     ) -> None:
-        self.callback_objects.loc[reference] = [timestamp, callback_object]
+        self._callback_objects.append({
+            'reference': reference,
+            'timestamp': timestamp,
+            'callback_object': callback_object,
+        })
 
     def add_callback_symbol(
         self, callback_object, timestamp, symbol
     ) -> None:
-        self.callback_symbols.loc[callback_object] = [timestamp, symbol]
+        self._callback_symbols.append({
+            'callback_object': callback_object,
+            'timestamp': timestamp,
+            'symbol': symbol,
+        })
 
     def add_callback_instance(
         self, callback_object, timestamp, duration, intra_process
     ) -> None:
-        data = {
+        self._callback_instances.append({
             'callback_object': callback_object,
-            'timestamp': timestamp,
-            'duration': duration,
+            'timestamp': np.datetime64(timestamp, 'ns'),
+            'duration': np.timedelta64(duration, 'ns'),
             'intra_process': intra_process,
-        }
-        self.callback_instances = self.callback_instances.append(data, ignore_index=True)
+        })
+
+    def add_rmw_take_instance(
+        self, subscription_handle, timestamp, message, source_timestamp, taken
+    ) -> None:
+        self._rmw_take_instances.append({
+            'subscription_handle': subscription_handle,
+            'timestamp': timestamp,
+            'message': message,
+            'source_timestamp': source_timestamp,
+            'taken': taken,
+        })
+
+    def add_rcl_take_instance(
+        self, timestamp, message
+    ) -> None:
+        self._rcl_take_instances.append({
+            'timestamp': timestamp,
+            'message': message,
+        })
+
+    def add_rclcpp_take_instance(
+        self, timestamp, message
+    ) -> None:
+        self._rclcpp_take_instances.append({
+            'timestamp': timestamp,
+            'message': message,
+        })
+
+    def add_lifecycle_state_machine(
+        self, handle, node_handle
+    ) -> None:
+        self._lifecycle_state_machines.append({
+            'state_machine_handle': handle,
+            'node_handle': node_handle,
+        })
+
+    def add_lifecycle_state_transition(
+        self, state_machine_handle, start_label, goal_label, timestamp
+    ) -> None:
+        self._lifecycle_transitions.append({
+            'state_machine_handle': state_machine_handle,
+            'start_label': start_label,
+            'goal_label': goal_label,
+            'timestamp': timestamp,
+        })
+
+    def _finalize(self) -> None:
+        # Some of the lists of dicts might be empty, and setting
+        # the index for an empty dataframe leads to an error
+        self.contexts = pd.DataFrame.from_dict(self._contexts)
+        if self._contexts:
+            self.contexts.set_index('context_handle', inplace=True, drop=True)
+        self.nodes = pd.DataFrame.from_dict(self._nodes)
+        if self._nodes:
+            self.nodes.set_index('node_handle', inplace=True, drop=True)
+        self.rmw_publishers = pd.DataFrame.from_dict(self._rmw_publishers)
+        if self._rmw_publishers:
+            self.rmw_publishers.set_index('publisher_handle', inplace=True, drop=True)
+        self.rcl_publishers = pd.DataFrame.from_dict(self._rcl_publishers)
+        if self._rcl_publishers:
+            self.rcl_publishers.set_index('publisher_handle', inplace=True, drop=True)
+        self.rmw_subscriptions = pd.DataFrame.from_dict(self._rmw_subscriptions)
+        if self._rmw_subscriptions:
+            self.rmw_subscriptions.set_index('subscription_handle', inplace=True, drop=True)
+        self.rcl_subscriptions = pd.DataFrame.from_dict(self._rcl_subscriptions)
+        if self._rcl_subscriptions:
+            self.rcl_subscriptions.set_index('subscription_handle', inplace=True, drop=True)
+        self.subscription_objects = pd.DataFrame.from_dict(self._subscription_objects)
+        if self._subscription_objects:
+            self.subscription_objects.set_index('subscription', inplace=True, drop=True)
+        self.services = pd.DataFrame.from_dict(self._services)
+        if self._services:
+            self.services.set_index('service_handle', inplace=True, drop=True)
+        self.clients = pd.DataFrame.from_dict(self._clients)
+        if self._clients:
+            self.clients.set_index('client_handle', inplace=True, drop=True)
+        self.timers = pd.DataFrame.from_dict(self._timers)
+        if self._timers:
+            self.timers.set_index('timer_handle', inplace=True, drop=True)
+        self.timer_node_links = pd.DataFrame.from_dict(self._timer_node_links)
+        if self._timer_node_links:
+            self.timer_node_links.set_index('timer_handle', inplace=True, drop=True)
+        self.callback_objects = pd.DataFrame.from_dict(self._callback_objects)
+        if self._callback_objects:
+            self.callback_objects.set_index('reference', inplace=True, drop=True)
+        self.callback_symbols = pd.DataFrame.from_dict(self._callback_symbols)
+        if self._callback_symbols:
+            self.callback_symbols.set_index('callback_object', inplace=True, drop=True)
+        self.lifecycle_state_machines = pd.DataFrame.from_dict(self._lifecycle_state_machines)
+        if self._lifecycle_state_machines:
+            self.lifecycle_state_machines.set_index(
+                'state_machine_handle', inplace=True, drop=True)
+        self.rclcpp_publish_instances = pd.DataFrame.from_dict(self._rclcpp_publish_instances)
+        self.rcl_publish_instances = pd.DataFrame.from_dict(self._rcl_publish_instances)
+        self.rmw_publish_instances = pd.DataFrame.from_dict(self._rmw_publish_instances)
+        self.rmw_take_instances = pd.DataFrame.from_dict(self._rmw_take_instances)
+        self.rcl_take_instances = pd.DataFrame.from_dict(self._rcl_take_instances)
+        self.rclcpp_take_instances = pd.DataFrame.from_dict(self._rclcpp_take_instances)
+        self.callback_instances = pd.DataFrame.from_dict(self._callback_instances)
+        self.lifecycle_transitions = pd.DataFrame.from_dict(self._lifecycle_transitions)
 
     def print_data(self) -> None:
         print('====================ROS 2 DATA MODEL===================')
@@ -162,11 +332,17 @@ class Ros2DataModel(DataModel):
         print('Nodes:')
         print(self.nodes.to_string())
         print()
-        print('Publishers:')
-        print(self.publishers.to_string())
+        print('Publishers (rmw):')
+        print(self.rmw_publishers.to_string())
         print()
-        print('Subscriptions:')
-        print(self.subscriptions.to_string())
+        print('Publishers (rcl):')
+        print(self.rcl_publishers.to_string())
+        print()
+        print('Subscriptions (rmw):')
+        print(self.rmw_subscriptions.to_string())
+        print()
+        print('Subscriptions (rcl):')
+        print(self.rcl_subscriptions.to_string())
         print()
         print('Subscription objects:')
         print(self.subscription_objects.to_string())
@@ -180,6 +356,9 @@ class Ros2DataModel(DataModel):
         print('Timers:')
         print(self.timers.to_string())
         print()
+        print('Timer-node links:')
+        print(self.timer_node_links.to_string())
+        print()
         print('Callback objects:')
         print(self.callback_objects.to_string())
         print()
@@ -188,4 +367,28 @@ class Ros2DataModel(DataModel):
         print()
         print('Callback instances:')
         print(self.callback_instances.to_string())
+        print()
+        print('Publish instances (rclcpp):')
+        print(self.rclcpp_publish_instances.to_string())
+        print()
+        print('Publish instances (rcl):')
+        print(self.rcl_publish_instances.to_string())
+        print()
+        print('Publish instances (rmw):')
+        print(self.rmw_publish_instances.to_string())
+        print()
+        print('Take instances (rmw):')
+        print(self.rmw_take_instances.to_string())
+        print()
+        print('Take instances (rcl):')
+        print(self.rcl_take_instances.to_string())
+        print()
+        print('Take instances (rclcpp):')
+        print(self.rclcpp_take_instances.to_string())
+        print()
+        print('Lifecycle state machines:')
+        print(self.lifecycle_state_machines.to_string())
+        print()
+        print('Lifecycle transitions:')
+        print(self.lifecycle_transitions.to_string())
         print('==================================================')

tracetools_analysis/tracetools_analysis/process.py

@@ -1,5 +1,6 @@
 #!/usr/bin/env python3
 # Copyright 2019 Robert Bosch GmbH
+# Copyright 2021 Christophe Bedard
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.
@@ -31,20 +32,29 @@ def add_args(parser: argparse.ArgumentParser) -> None:
     parser.add_argument(
         'input_path',
         help='the path to a converted file to import and process, '
-        'or the path to a CTF directory to convert and process')
+        'or the path to a trace directory to convert and process')
     parser.add_argument(
         '-f', '--force-conversion', dest='force_conversion',
         action='store_true', default=False,
         help='re-convert trace directory even if converted file is found')
-    parser.add_argument(
+    command_group = parser.add_mutually_exclusive_group()
+    command_group.add_argument(
         '-s', '--hide-results', dest='hide_results',
         action='store_true', default=False,
         help='hide/suppress results from being printed')
+    command_group.add_argument(
+        '-c', '--convert-only', dest='convert_only',
+        action='store_true', default=False,
+        help=(
+            'only do the first step of converting the file, without processing it '
+            '(this should not be necessary, since conversion is done automatically and is mostly '
+            'just an implementation detail)'
+        ))
 
 
 def parse_args() -> argparse.Namespace:
-    parser = argparse.ArgumentParser(description='Process a file converted from a trace '
-                                                 'directory and output model data.')
+    parser = argparse.ArgumentParser(
+        description='Process ROS 2 trace data and output model data.')
     add_args(parser)
     return parser.parse_args()
 
@@ -53,13 +63,21 @@ def process(
     input_path: str,
     force_conversion: bool = False,
     hide_results: bool = False,
+    convert_only: bool = False,
 ) -> int:
     """
-    Process converted trace file.
+    Process ROS 2 trace data and output model data.
+
+    The trace data will be automatically converted into
+    an internal intermediate representation if needed.
 
     :param input_path: the path to a converted file or trace directory
     :param force_conversion: whether to re-creating converted file even if it is found
     :param hide_results: whether to hide results and not print them
+    :param convert_only: whether to only convert the file into our internal intermediate
+        representation, without processing it. This should usually not be necessary since
+        conversion is done automatically only when needed or when explicitly requested with
+        force_conversion; conversion is mostly just an implementation detail
     """
     input_path = os.path.expanduser(input_path)
     if not os.path.exists(input_path):
@@ -69,6 +87,11 @@ def process(
     start_time = time.time()
 
     events = load_file(input_path, do_convert_if_needed=True, force_conversion=force_conversion)
+
+    # Return now if we only need to convert the file
+    if convert_only:
+        return 0
+
     processor = Processor(Ros2Handler())
     processor.process(events)
 
@@ -86,4 +109,5 @@ def main():
         args.input_path,
         args.force_conversion,
         args.hide_results,
+        args.convert_only,
     )

tracetools_analysis/tracetools_analysis/processor/__init__.py

@@ -1,4 +1,5 @@
 # Copyright 2019 Robert Bosch GmbH
+# Copyright 2021 Christophe Bedard
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.
@@ -40,9 +41,9 @@ class EventMetadata():
         event_name: str,
         timestamp: int,
         cpu_id: int,
-        procname: str = None,
-        pid: int = None,
-        tid: int = None,
+        procname: Optional[str] = None,
+        pid: Optional[int] = None,
+        tid: Optional[int] = None,
     ) -> None:
         """
         Create an EventMetadata.
@@ -196,6 +197,15 @@ class EventHandler(Dependant):
         processor.process(events)
         return handler_object
 
+    def finalize(self) -> None:
+        """
+        Finalize the event handler.
+
+        This should be called at the end, once all events have been processed.
+        """
+        if self._data_model:
+            self._data_model.finalize()
+
 
 class DependencySolver():
     """
@@ -417,6 +427,7 @@ class Processor():
                     self._process_event(event)
                     self._progress_display.did_work()
                 self._progress_display.done(erase=erase_progress)
+            self._finalize_processing()
             self._processing_done = True
 
     def _process_event(self, event: DictEvent) -> None:
@@ -450,6 +461,11 @@ class Processor():
                 metadata = EventMetadata(event_name, timestamp, cpu_id, procname, pid, tid)
                 handler_function(event, metadata)
 
+    def _finalize_processing(self) -> None:
+        """Notify handlers that processing is done by calling corresponding method."""
+        for handler in self._expanded_handlers:
+            handler.finalize()
+
     def print_data(self) -> None:
         """Print processed data."""
         if self._processing_done:
@@ -495,7 +511,7 @@ class AutoProcessor():
         Get applicable EventHandler instances for a list of events.
 
         :param events: the list of events
-        :return the concrete EventHandler instances which are applicable
+        :return: the concrete EventHandler instances which are applicable
         """
         event_names = Processor.get_event_names(events)
         # Force import of all processor submodules (i.e. files) so that we can find all

tracetools_analysis/tracetools_analysis/processor/ros2.py

@@ -1,4 +1,5 @@
 # Copyright 2019 Robert Bosch GmbH
+# Copyright 2020 Christophe Bedard
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.
@@ -19,6 +20,7 @@ from typing import Set
 from typing import Tuple
 
 from tracetools_read import get_field
+from tracetools_trace.tools import tracepoints as tp
 
 from . import EventHandler
 from . import EventMetadata
@@ -40,34 +42,56 @@ class Ros2Handler(EventHandler):
         """Create a Ros2Handler."""
         # Link a ROS trace event to its corresponding handling method
         handler_map: HandlerMap = {
-            'ros2:rcl_init':
+            tp.rcl_init:
                 self._handle_rcl_init,
-            'ros2:rcl_node_init':
+            tp.rcl_node_init:
                 self._handle_rcl_node_init,
-            'ros2:rcl_publisher_init':
+            tp.rmw_publisher_init:
+                self._handle_rmw_publisher_init,
+            tp.rcl_publisher_init:
                 self._handle_rcl_publisher_init,
-            'ros2:rcl_subscription_init':
+            tp.rclcpp_publish:
+                self._handle_rclcpp_publish,
+            tp.rcl_publish:
+                self._handle_rcl_publish,
+            tp.rmw_publish:
+                self._handle_rmw_publish,
+            tp.rmw_subscription_init:
+                self._handle_rmw_subscription_init,
+            tp.rcl_subscription_init:
                 self._handle_rcl_subscription_init,
-            'ros2:rclcpp_subscription_init':
+            tp.rclcpp_subscription_init:
                 self._handle_rclcpp_subscription_init,
-            'ros2:rclcpp_subscription_callback_added':
+            tp.rclcpp_subscription_callback_added:
                 self._handle_rclcpp_subscription_callback_added,
-            'ros2:rcl_service_init':
+            tp.rmw_take:
+                self._handle_rmw_take,
+            tp.rcl_take:
+                self._handle_rcl_take,
+            tp.rclcpp_take:
+                self._handle_rclcpp_take,
+            tp.rcl_service_init:
                 self._handle_rcl_service_init,
-            'ros2:rclcpp_service_callback_added':
+            tp.rclcpp_service_callback_added:
                 self._handle_rclcpp_service_callback_added,
-            'ros2:rcl_client_init':
+            tp.rcl_client_init:
                 self._handle_rcl_client_init,
-            'ros2:rcl_timer_init':
+            tp.rcl_timer_init:
                 self._handle_rcl_timer_init,
-            'ros2:rclcpp_timer_callback_added':
+            tp.rclcpp_timer_callback_added:
                 self._handle_rclcpp_timer_callback_added,
-            'ros2:rclcpp_callback_register':
+            tp.rclcpp_timer_link_node:
+                self._handle_rclcpp_timer_link_node,
+            tp.rclcpp_callback_register:
                 self._handle_rclcpp_callback_register,
-            'ros2:callback_start':
+            tp.callback_start:
                 self._handle_callback_start,
-            'ros2:callback_end':
+            tp.callback_end:
                 self._handle_callback_end,
+            tp.rcl_lifecycle_state_machine_init:
+                self._handle_rcl_lifecycle_state_machine_init,
+            tp.rcl_lifecycle_transition:
+                self._handle_rcl_lifecycle_transition,
         }
         super().__init__(
             handler_map=handler_map,
@@ -81,7 +105,7 @@ class Ros2Handler(EventHandler):
     @staticmethod
     def required_events() -> Set[str]:
         return {
-            'ros2:rcl_init',
+            tp.rcl_init,
         }
 
     @property
@@ -108,6 +132,14 @@ class Ros2Handler(EventHandler):
         namespace = get_field(event, 'namespace')
         self.data.add_node(handle, timestamp, tid, rmw_handle, name, namespace)
 
+    def _handle_rmw_publisher_init(
+        self, event: Dict, metadata: EventMetadata,
+    ) -> None:
+        handle = get_field(event, 'rmw_publisher_handle')
+        timestamp = metadata.timestamp
+        gid = get_field(event, 'gid')
+        self.data.add_rmw_publisher(handle, timestamp, gid)
+
     def _handle_rcl_publisher_init(
         self, event: Dict, metadata: EventMetadata,
     ) -> None:
@@ -117,7 +149,37 @@ class Ros2Handler(EventHandler):
         rmw_handle = get_field(event, 'rmw_publisher_handle')
         topic_name = get_field(event, 'topic_name')
         depth = get_field(event, 'queue_depth')
-        self.data.add_publisher(handle, timestamp, node_handle, rmw_handle, topic_name, depth)
+        self.data.add_rcl_publisher(handle, timestamp, node_handle, rmw_handle, topic_name, depth)
+
+    def _handle_rclcpp_publish(
+        self, event: Dict, metadata: EventMetadata,
+    ) -> None:
+        timestamp = metadata.timestamp
+        message = get_field(event, 'message')
+        self.data.add_rclcpp_publish_instance(timestamp, message)
+
+    def _handle_rcl_publish(
+        self, event: Dict, metadata: EventMetadata,
+    ) -> None:
+        handle = get_field(event, 'publisher_handle')
+        timestamp = metadata.timestamp
+        message = get_field(event, 'message')
+        self.data.add_rcl_publish_instance(handle, timestamp, message)
+
+    def _handle_rmw_publish(
+        self, event: Dict, metadata: EventMetadata,
+    ) -> None:
+        timestamp = metadata.timestamp
+        message = get_field(event, 'message')
+        self.data.add_rmw_publish_instance(timestamp, message)
+
+    def _handle_rmw_subscription_init(
+        self, event: Dict, metadata: EventMetadata,
+    ) -> None:
+        handle = get_field(event, 'rmw_subscription_handle')
+        timestamp = metadata.timestamp
+        gid = get_field(event, 'gid')
+        self.data.add_rmw_subscription(handle, timestamp, gid)
 
     def _handle_rcl_subscription_init(
         self, event: Dict, metadata: EventMetadata,
@@ -148,6 +210,32 @@ class Ros2Handler(EventHandler):
         callback_object = get_field(event, 'callback')
         self.data.add_callback_object(subscription_pointer, timestamp, callback_object)
 
+    def _handle_rmw_take(
+        self, event: Dict, metadata: EventMetadata,
+    ) -> None:
+        subscription_handle = get_field(event, 'rmw_subscription_handle')
+        timestamp = metadata.timestamp
+        message = get_field(event, 'message')
+        source_timestamp = get_field(event, 'source_timestamp')
+        taken = bool(get_field(event, 'taken'))
+        self.data.add_rmw_take_instance(
+            subscription_handle, timestamp, message, source_timestamp, taken
+        )
+
+    def _handle_rcl_take(
+        self, event: Dict, metadata: EventMetadata,
+    ) -> None:
+        timestamp = metadata.timestamp
+        message = get_field(event, 'message')
+        self.data.add_rcl_take_instance(timestamp, message)
+
+    def _handle_rclcpp_take(
+        self, event: Dict, metadata: EventMetadata,
+    ) -> None:
+        timestamp = metadata.timestamp
+        message = get_field(event, 'message')
+        self.data.add_rclcpp_take_instance(timestamp, message)
+
     def _handle_rcl_service_init(
         self, event: Dict, metadata: EventMetadata,
     ) -> None:
@@ -193,6 +281,14 @@ class Ros2Handler(EventHandler):
         callback_object = get_field(event, 'callback')
         self.data.add_callback_object(handle, timestamp, callback_object)
 
+    def _handle_rclcpp_timer_link_node(
+        self, event: Dict, metadata: EventMetadata,
+    ) -> None:
+        handle = get_field(event, 'timer_handle')
+        timestamp = metadata.timestamp
+        node_handle = get_field(event, 'node_handle')
+        self.data.add_timer_node_link(handle, timestamp, node_handle)
+
     def _handle_rclcpp_callback_register(
         self, event: Dict, metadata: EventMetadata,
     ) -> None:
@@ -226,3 +322,19 @@ class Ros2Handler(EventHandler):
                 bool(is_intra_process))
         else:
             print(f'No matching callback start for callback object "{callback_object}"')
+
+    def _handle_rcl_lifecycle_state_machine_init(
+        self, event: Dict, metadata: EventMetadata,
+    ) -> None:
+        node_handle = get_field(event, 'node_handle')
+        state_machine = get_field(event, 'state_machine')
+        self.data.add_lifecycle_state_machine(state_machine, node_handle)
+
+    def _handle_rcl_lifecycle_transition(
+        self, event: Dict, metadata: EventMetadata,
+    ) -> None:
+        timestamp = metadata.timestamp
+        state_machine = get_field(event, 'state_machine')
+        start_label = get_field(event, 'start_label')
+        goal_label = get_field(event, 'goal_label')
+        self.data.add_lifecycle_state_transition(state_machine, start_label, goal_label, timestamp)

tracetools_analysis/tracetools_analysis/scripts/cb_durations.py

@@ -13,6 +13,7 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 
+import numpy as np
 import pandas as pd
 
 from tracetools_analysis.loading import load_file
@@ -48,7 +49,8 @@ def main():
 
     stat_data = []
     for ptr, name in du.get_callback_symbols().items():
-        durations = du.get_callback_durations(ptr)['duration']
+        # Convert to milliseconds to display it
+        durations = du.get_callback_durations(ptr)['duration'] * 1000 / np.timedelta64(1, 's')
         stat_data.append((
             durations.count(),
             durations.sum(),
@@ -57,5 +59,8 @@ def main():
             format_fn(name),
         ))
 
-    stat_df = pd.DataFrame(columns=['Count', 'Sum', 'Mean', 'Std', 'Name'], data=stat_data)
-    print(stat_df.sort_values(by='Sum', ascending=False).to_string())
+    stat_df = pd.DataFrame(
+        columns=['Count', 'Sum (ms)', 'Mean (ms)', 'Std', 'Name'],
+        data=stat_data,
+    )
+    print(stat_df.sort_values(by='Sum (ms)', ascending=False).to_string())

tracetools_analysis/tracetools_analysis/utils/__init__.py

@@ -19,6 +19,7 @@ from typing import List
 from typing import Optional
 from typing import Union
 
+import numpy as np
 from pandas import DataFrame
 
 from ..data_model import DataModel
@@ -72,12 +73,12 @@ class DataModelUtil():
         # Convert from ns to ms
         if len(columns_ns_to_ms) > 0:
             df[columns_ns_to_ms] = df[columns_ns_to_ms].applymap(
-                lambda t: t / 1000000.0
+                lambda t: t / 1000000.0 if not np.isnan(t) else t
             )
         # Convert from ns to ms + ms to datetime, as UTC
         if len(columns_ns_to_datetime) > 0:
             df[columns_ns_to_datetime] = df[columns_ns_to_datetime].applymap(
-                lambda t: dt.utcfromtimestamp(t / 1000000000.0)
+                lambda t: dt.utcfromtimestamp(t / 1000000000.0) if not np.isnan(t) else t
             )
         return df
 

tracetools_analysis/tracetools_analysis/utils/ros2.py

@@ -1,5 +1,6 @@
 # Copyright 2019 Robert Bosch GmbH
 # Copyright 2019 Apex.AI, Inc.
+# Copyright 2021 Christophe Bedard
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.
@@ -16,11 +17,15 @@
 """Module for ROS data model utils."""
 
 from typing import Any
+from typing import Dict
 from typing import List
 from typing import Mapping
 from typing import Optional
 from typing import Union
 
+import numpy as np
+import pandas as pd
+from pandas import concat
 from pandas import DataFrame
 
 from . import DataModelUtil
@@ -113,17 +118,114 @@ class Ros2DataModelUtil(DataModelUtil):
         callback_instances = self.data.callback_instances
         callback_symbols = self.data.callback_symbols
 
+        if callback_instances.empty:
+            return {}
+
         # Get a list of callback objects
         callback_objects = set(callback_instances['callback_object'])
         # Get their symbol
-        return {
-            obj: self._prettify(callback_symbols.loc[obj, 'symbol']) for obj in callback_objects
-        }
+        pretty_symbols = {}
+        for obj in callback_objects:
+            # There could be multiple callback symbols for the same callback object (pointer),
+            # e.g., if we create and destroy subscriptions dynamically
+            symbols = callback_symbols.loc[obj, 'symbol']
+            symbols = symbols if isinstance(symbols, pd.Series) else [symbols]
+            # In that case, just combine the symbols
+            pretty_symbols[obj] = ' and '.join(self._prettify(symbol) for symbol in symbols)
+        return pretty_symbols
 
     def get_tids(self) -> List[str]:
         """Get a list of thread ids corresponding to the nodes."""
         return self.data.nodes['tid'].unique().tolist()
 
+    def get_rcl_publish_instances(self, topic_name) -> Optional[DataFrame]:
+        """
+        Get rcl publish instances for all publishers with the given topic name.
+
+        :param topic_name: the topic name
+        :return: dataframe with [publisher handle, publish timestamp, message] columns,
+            or `None` if topic name not found
+        """
+        # We could have more than one publisher for the topic
+        publisher_handles = self.data.rcl_publishers.loc[
+            self.data.rcl_publishers['topic_name'] == topic_name
+        ].index.values.astype(int)
+        if len(publisher_handles) == 0:
+            return None
+        publish_instances = self.data.rcl_publish_instances.loc[
+            self.data.rcl_publish_instances['publisher_handle'].isin(publisher_handles)
+        ]
+        publish_instances.reset_index(drop=True, inplace=True)
+        self.convert_time_columns(publish_instances, [], ['timestamp'], True)
+        return publish_instances
+
+    def get_publish_instances(self) -> DataFrame:
+        """
+        Get all publish instances (rclcpp, rcl, rmw) in a single dataframe.
+
+        The rows are ordered by publish timestamp, so the order will usually be: rclcpp, rcl, rmw.
+        However, this does not apply to publications from internal publishers, i.e.,
+        publications that originate from below rclcpp (rcl or rmw).
+        TODO(christophebedard) find heuristic to exclude those?
+
+        :return: dataframe with [timestamp, message, layer 'rclcpp'|'rcl'|'rmw', publisher handle]
+            columns, ordered by timestamp,
+            and where the publisher handle is only set (non-zero) for 'rcl' publish instances
+        """
+        # Add publisher handle columns with zeros for dataframes that do not have this column,
+        # otherwise NaN is used and the publisher handle values for rcl are converted to float
+        rclcpp_instances = self.data.rclcpp_publish_instances.copy()
+        rclcpp_instances['layer'] = 'rclcpp'
+        rclcpp_instances['publisher_handle'] = 0
+        rcl_instances = self.data.rcl_publish_instances.copy()
+        rcl_instances['layer'] = 'rcl'
+        rmw_instances = self.data.rmw_publish_instances.copy()
+        rmw_instances['layer'] = 'rmw'
+        rmw_instances['publisher_handle'] = 0
+        publish_instances = concat([rclcpp_instances, rcl_instances, rmw_instances], axis=0)
+        publish_instances.sort_values('timestamp', inplace=True)
+        publish_instances.reset_index(drop=True, inplace=True)
+        self.convert_time_columns(publish_instances, [], ['timestamp'], True)
+        return publish_instances
+
+    def get_take_instances(self) -> DataFrame:
+        """
+        Get all take instances (rmw, rcl, rclcpp) in a single dataframe.
+
+        The rows are ordered by take timestamp, so the order will usually be: rmw, rcl, rclcpp.
+        However, thsi does not apply to takes from internal subscriptions, i.e.,
+        takes that originate from below rclcpp (rcl or rmw).
+        TODO(christophebedard) find heuristic to exclude those?
+
+        :return: dataframe with
+            [timestamp, message, source timestamp,
+                layer 'rmw'|'rcl'|'rmw', rmw subscription handle, taken]
+            columns, ordered by timestamp,
+            and where the rmw subscription handle, source timestamp, and taken flag are only set
+            (non-zero, non-False) for 'rmw' take instances
+        """
+        rmw_instances = self.data.rmw_take_instances.copy()
+        rmw_instances['layer'] = 'rmw'
+        rmw_instances.rename(
+            columns={'subscription_handle': 'rmw_subscription_handle'},
+            inplace=True,
+        )
+        rcl_instances = self.data.rcl_take_instances.copy()
+        rcl_instances['layer'] = 'rcl'
+        rcl_instances['rmw_subscription_handle'] = 0
+        rcl_instances['source_timestamp'] = 0
+        rcl_instances['taken'] = False
+        rclcpp_instances = self.data.rclcpp_take_instances.copy()
+        rclcpp_instances['layer'] = 'rclcpp'
+        rclcpp_instances['rmw_subscription_handle'] = 0
+        rclcpp_instances['source_timestamp'] = 0
+        rclcpp_instances['taken'] = False
+        take_instances = concat([rmw_instances, rcl_instances, rclcpp_instances], axis=0)
+        take_instances.sort_values('timestamp', inplace=True)
+        take_instances.reset_index(drop=True, inplace=True)
+        self.convert_time_columns(take_instances, [], ['timestamp', 'source_timestamp'], True)
+        return take_instances
+
     def get_callback_durations(
         self,
         callback_obj: int,
@@ -132,15 +234,13 @@ class Ros2DataModelUtil(DataModelUtil):
         Get durations of callback instances for a given callback object.
 
         :param callback_obj: the callback object value
-        :return: a dataframe containing the start timestamp (datetime)
-        and duration (ms) of all callback instances for that object
+        :return: a dataframe containing the start timestamp (np.timestamp64)
+            and duration (np.timedelta64) of all callback instances for that object
         """
-        data = self.data.callback_instances.loc[
+        return self.data.callback_instances.loc[
             self.data.callback_instances.loc[:, 'callback_object'] == callback_obj,
             ['timestamp', 'duration']
         ]
-        # Time conversion
-        return self.convert_time_columns(data, ['duration'], ['timestamp'])
 
     def get_node_tid_from_name(
         self,
@@ -199,7 +299,7 @@ class Ros2DataModelUtil(DataModelUtil):
         if reference in self.data.timers.index:
             type_name = 'Timer'
             info = self.get_timer_handle_info(reference)
-        elif reference in self.data.publishers.index:
+        elif reference in self.data.rcl_publishers.index:
             type_name = 'Publisher'
             info = self.get_publisher_handle_info(reference)
         elif reference in self.data.subscription_objects.index:
@@ -214,7 +314,8 @@ class Ros2DataModelUtil(DataModelUtil):
 
         if info is None:
             return None
-        return f'{type_name} -- {self.format_info_dict(info)}'
+        info_str = self.format_info_dict(info, sep='\n')
+        return f'{type_name}\n{info_str}'
 
     def get_timer_handle_info(
         self,
@@ -226,14 +327,18 @@ class Ros2DataModelUtil(DataModelUtil):
         :param timer_handle: the timer handle value
         :return: a dictionary with name:value info, or `None` if it fails
         """
-        # TODO find a way to link a timer to a specific node
         if timer_handle not in self.data.timers.index:
             return None
 
+        node_handle = self.data.timer_node_links.loc[timer_handle, 'node_handle']
+        node_handle_info = self.get_node_handle_info(node_handle)
+        if node_handle_info is None:
+            return None
+
         tid = self.data.timers.loc[timer_handle, 'tid']
         period_ns = self.data.timers.loc[timer_handle, 'period']
         period_ms = period_ns / 1000000.0
-        return {'tid': tid, 'period': f'{period_ms:.0f} ms'}
+        return {**node_handle_info, 'tid': tid, 'period': f'{period_ms:.0f} ms'}
 
     def get_publisher_handle_info(
         self,
@@ -245,14 +350,14 @@ class Ros2DataModelUtil(DataModelUtil):
         :param publisher_handle: the publisher handle value
         :return: a dictionary with name:value info, or `None` if it fails
         """
-        if publisher_handle not in self.data.publishers.index:
+        if publisher_handle not in self.data.rcl_publishers.index:
             return None
 
-        node_handle = self.data.publishers.loc[publisher_handle, 'node_handle']
+        node_handle = self.data.rcl_publishers.loc[publisher_handle, 'node_handle']
         node_handle_info = self.get_node_handle_info(node_handle)
         if node_handle_info is None:
             return None
-        topic_name = self.data.publishers.loc[publisher_handle, 'topic_name']
+        topic_name = self.data.rcl_publishers.loc[publisher_handle, 'topic_name']
         publisher_info = {'topic': topic_name}
         return {**node_handle_info, **publisher_info}
 
@@ -283,7 +388,7 @@ class Ros2DataModelUtil(DataModelUtil):
             columns=['timestamp'],
             axis=1,
         )
-        subscriptions_simple = self.data.subscriptions.drop(
+        subscriptions_simple = self.data.rcl_subscriptions.drop(
             columns=['timestamp', 'rmw_handle'],
             inplace=False,
         )
@@ -302,12 +407,27 @@ class Ros2DataModelUtil(DataModelUtil):
             right_index=True,
         )
 
-        node_handle = subscriptions_info.loc[subscription_reference, 'node_handle']
-        node_handle_info = self.get_node_handle_info(node_handle)
-        if node_handle_info is None:
-            return None
-        topic_name = subscriptions_info.loc[subscription_reference, 'topic_name']
+        # There could be multiple subscriptions for the same subscription object pointer, e.g., if
+        # we create and destroy subscriptions dynamically, so this subscription could belong to
+        # more than one node
+        # In that case, just combine the information
+        node_handles = subscriptions_info.loc[subscription_reference, 'node_handle']
+        node_handles = node_handles if isinstance(node_handles, pd.Series) else [node_handles]
+        topic_names = subscriptions_info.loc[subscription_reference, 'topic_name']
+        topic_names = topic_names if isinstance(topic_names, pd.Series) else [topic_names]
+        nodes_handle_info = []
+        for node_handle in node_handles:
+            node_handle_info = self.get_node_handle_info(node_handle)
+            if node_handle_info is None:
+                return None
+            nodes_handle_info.append(node_handle_info)
+        topic_name = ' and '.join(topic_names)
         subscription_info = {'topic': topic_name}
+        # Turn list of dicts into dict of combined values
+        node_handle_info = {
+            key: ' and '.join({str(info[key]) for info in nodes_handle_info})
+            for key in nodes_handle_info[0]
+        }
         return {**node_handle_info, **subscription_info}
 
     def get_service_handle_info(
@@ -369,8 +489,87 @@ class Ros2DataModelUtil(DataModelUtil):
         tid = self.data.nodes.loc[node_handle, 'tid']
         return {'node': node_name, 'tid': tid}
 
+    def get_lifecycle_node_handle_info(
+        self,
+        lifecycle_node_handle: int,
+    ) -> Optional[Mapping[str, Any]]:
+        """
+        Get information about a lifecycle node handle.
+
+        :param lifecycle_node_handle: the lifecycle node handle value
+        :return: a dictionary with name:value info, or `None` if it fails
+        """
+        node_info = self.get_node_handle_info(lifecycle_node_handle)
+        if not node_info:
+            return None
+        # TODO(christophebedard) validate that it is an actual lifecycle node and not just a node
+        node_info['lifecycle node'] = node_info.pop('node')  # type: ignore
+        return node_info
+
+    def get_lifecycle_node_state_intervals(
+        self,
+    ) -> Dict[int, DataFrame]:
+        """
+        Get state intervals (start, end) for all lifecycle nodes.
+
+        The returned dictionary contains a dataframe for each lifecycle node handle:
+            (lifecycle node handle -> [state string, start timestamp, end timestamp])
+
+        In cases where there is no explicit timestamp (e.g. end of state),
+        `np.nan` is used instead.
+        The node creation timestamp is used as the start timestamp of the first state.
+        TODO(christophebedard) do the same with context shutdown for the last end time
+
+        :return: dictionary with a dataframe (with each row containing state interval information)
+            for each lifecycle node
+        """
+        lifecycle_transitions = self.data.lifecycle_transitions.copy()
+        if lifecycle_transitions.empty:
+            return {}
+
+        data = {}
+        state_machine_handles = set(lifecycle_transitions['state_machine_handle'])
+        for state_machine_handle in state_machine_handles:
+            transitions = lifecycle_transitions.loc[
+                lifecycle_transitions.loc[:, 'state_machine_handle'] == state_machine_handle,
+                ['start_label', 'goal_label', 'timestamp']
+            ]
+            # Get lifecycle node handle from state machine handle
+            lifecycle_node_handle = self.data.lifecycle_state_machines.loc[
+                state_machine_handle, 'node_handle'
+            ]
+
+            # Infer first start time from node creation timestamp
+            node_creation_timestamp = self.data.nodes.loc[lifecycle_node_handle, 'timestamp']
+
+            # Add initial and final timestamps
+            # Last states has an unknown end timestamp
+            first_state_label = transitions.loc[0, 'start_label']
+            last_state_label = transitions.loc[transitions.index[-1], 'goal_label']
+            transitions.loc[-1] = ['', first_state_label, node_creation_timestamp]
+            transitions.index = transitions.index + 1
+            transitions.sort_index(inplace=True)
+            transitions.loc[transitions.index.max() + 1] = [last_state_label, '', np.nan]
+
+            # Process transitions to get start/end timestamp of each instance of a state
+            end_timestamps = transitions[['timestamp']].shift(periods=-1)
+            end_timestamps.rename(
+                columns={end_timestamps.columns[0]: 'end_timestamp'}, inplace=True)
+            states = concat([transitions, end_timestamps], axis=1)
+            states.drop(['start_label'], axis=1, inplace=True)
+            states.rename(
+                columns={'goal_label': 'state', 'timestamp': 'start_timestamp'}, inplace=True)
+            states.drop(states.tail(1).index, inplace=True)
+
+            # Convert time columns
+            self.convert_time_columns(states, [], ['start_timestamp', 'end_timestamp'], True)
+
+            data[lifecycle_node_handle] = states
+        return data
+
     def format_info_dict(
         self,
         info_dict: Mapping[str, Any],
+        sep: str = ', ',
     ) -> str:
-        return ', '.join([f'{key}: {val}' for key, val in info_dict.items()])
+        return sep.join(f'{key}: {val}' for key, val in info_dict.items())